| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679291
GI number: 15679291
Start: 1167234
End: 1169423
Strand: Direct
Name: Not Available
Synonym: MTH1287
Alternate gene names: 15679291
Gene position: 1167234-1169423 (Clockwise)
Preceding gene: 15679289
Following gene: 15679293
Centisome position: 66.65
GC content: 53.65
Gene sequence:
>2190_bases ATGGGGAACATGGTGGAAATAGTCCTCGAGGGTAGCCACGAAGGCATTGAAGAATTCATTGAGAGGCTTAAGAAAGATAA ACCCCCCATTTCAAGGATAAACAGTATAAAAAAGGACATTTTTGAGGTCAATGAGGCATCATTCACTGAATTCATTATAA AGGAGAGTTCATCCAGTTCCTCAGGGACATCTGTAATACCCGCGGATGTCGCCACCTGCAGCAGCTGTCTGGAAGAGATG ATGGATGAGAATAACAGGAGATACCTCTATCCCTTCACCGCCTGCACAGACTGCGGGCCCAGGTTCACCGTTATAGAATC CATTCCCTATGACCGTGAAAGGACCAGCATGCGTGATTTTCCTCTCTGCAGCTCCTGCATGGAGGAATACCTCAACCCCC TCGACAGGAGGTACCATGCAGAGGCCACATGCTGCCCCATCTGCGGTCCAAAGCCCTTCCTGTACAGGGATGGGATCCTG AAGACCCATGACCCCATTAAAATGGCGGCAGAACTCCTTGATGATGGCAGCATACTTGCAGTTAAGGGTATCGGTGGTAC GCACCTCGTCTGCCGTGCCGATGATGATGAGGTAGTTAAAAGGCTCCGTTCAGGGCTCGGAAGACCAAATCAGCCCTTCG CATGCATGTCCCCTGACCTCGAATCCATAGAGTCCTATGCGTCCATATCAGACGTGGAGGAGGAAGCCCTCACCTCAAGG AGGAGGCCCATCGTTGTCCTGAAAAAAAGCCGGGACTACTGCCTGGCCCCCTCGGTTGCACCGGGCCTCCATAACATAGG GGTCATGTTACCCTACTCTGGTCTTCACCATGTCCTCCTGAGGTACACAGAGGCGCCGGCCTATGTGATGACATCTGCAA ACAGGCCAGGGGACCCCATGTTCATAGAGAACACTGAGATCATAGGGGGCCTTCAGGGGATAGCAGATTACTTCCTGCTC CATGACCGAAGGATTGTGAACCGCTGCGATGACTCTGTTGTCCGTTTCAGGGGTGGTGAGATGGCATTCATAAGGAGGTC CCGCGGATATGCCCCTGAACCCTACGAGATCCCCCATGTTGCCGGTGACGTCTCGGCAATCTGCCTGGGACCGGAACTTG ACGTTACATTCTCGGTGCTGAAGGGTGGTCAGTGCTATGTCTCCCAGCACATAGGCAACACCTCAAGGTATGACACCCTC CTCTTTCTTAAGGACGCTGTGGATTACCTCATGGGCATAACCGGGACAGAGGATGTTGATGTTATAGCCTGTGACCTGCA CCCCCAGTTCCTCACAACATCCTATGCTGAGGAACTCGCCAGCAGGTTCTCTGCAGAGGTCCTGAGGGTCCAGCACCACC ACGCCCATGCCCTTGCCCTGATGCTTGATGCTGGTGTCGATGAGTGCATATGCATAGCTGCAGATGGTGTTGGTTACGGT GATGACGGTACATCATGGGGTGGTGAGATACTCCACTGCCATGGTTCAGATTATGAGAGACTGGGGAGTCTGATGCCCCA GAGGATGCCGGGCGGTGATCTTGCGACAAGGTACCCTGCAAGGATGCTCCTCTCCATGTTGAGGGGACGCTATGAGGGGG ACCTCCAGGAGCTATTCAGTGAGAGGTACTCTGACTATTTCCCCCACGGCGAGAGGGAGATCGGTGTGGTGATGAGGCAG CTGGAGTCCGGGCTGAATACAGGTATAAGTACAGGCACCGGGCGTGTGCTTGACGCCATCTCAGCAGCCCTCAGGATCTG TGGTGTAAGGACCTATGAGGGTGAGTGTGCAATGAAACTGGAATCCGAGGCCTTCAGGGCCTCTGGAAAGCTGAGTATGC CCTTTGAGGTTAAAGAAAAAGGTGGGAGGTACATCCTGGACACATCAGCCATCCTGCTGGATGTCATGGAACTTATTGAT AGGGGTGAGGATAGAGCAGAGATAGCCCATGCCGCCCAGAAAGCCGTTGCAGAGGGCCTTGCAGAGATGGCGGTACTTGC AGCAGATGATGCTGGAGTGAAGTGTATCGGCGGGACCGGTGGCGTGTTCTATAATGAGGCCATAAGTCTCGCTGTGAGGG ATTACGTCACAGAGAGGGGTTACAGGTTCATCCAGCACAGGAATTCCTGTGCAGGTGATGGCTCAGTTTCCCTAGGACAG GCTGTTGCAGTGGCCCTCAGATACCGTTAG
Upstream 100 bases:
>100_bases GTGCCCATCTCACAGTGGAGGGAATAGTCCAGGGCGTTGGCTTCAGGCCAGCGGTCTACAGACTTGCAAAGGAACTCAGC CTCACGGGATACGTGAGAAC
Downstream 100 bases:
>100_bases GCACCTTCAGTCCATATAAATAAGGTGGGGGTCATGTCACTCCATTTTCCTTCGAATCTCTGCTTCCATCAGCAGGTCCT CGGCCCTCCGCTTAAGGTGA
Product: transcriptional regulator HypF-like protein
Products: NA
Alternate protein names: Carbamoyl phosphate-converting enzyme hypF; [NiFe]-hydrogenase maturation factor hypF; Hydrogenase maturation protein hypF [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MGNMVEIVLEGSHEGIEEFIERLKKDKPPISRINSIKKDIFEVNEASFTEFIIKESSSSSSGTSVIPADVATCSSCLEEM MDENNRRYLYPFTACTDCGPRFTVIESIPYDRERTSMRDFPLCSSCMEEYLNPLDRRYHAEATCCPICGPKPFLYRDGIL KTHDPIKMAAELLDDGSILAVKGIGGTHLVCRADDDEVVKRLRSGLGRPNQPFACMSPDLESIESYASISDVEEEALTSR RRPIVVLKKSRDYCLAPSVAPGLHNIGVMLPYSGLHHVLLRYTEAPAYVMTSANRPGDPMFIENTEIIGGLQGIADYFLL HDRRIVNRCDDSVVRFRGGEMAFIRRSRGYAPEPYEIPHVAGDVSAICLGPELDVTFSVLKGGQCYVSQHIGNTSRYDTL LFLKDAVDYLMGITGTEDVDVIACDLHPQFLTTSYAEELASRFSAEVLRVQHHHAHALALMLDAGVDECICIAADGVGYG DDGTSWGGEILHCHGSDYERLGSLMPQRMPGGDLATRYPARMLLSMLRGRYEGDLQELFSERYSDYFPHGEREIGVVMRQ LESGLNTGISTGTGRVLDAISAALRICGVRTYEGECAMKLESEAFRASGKLSMPFEVKEKGGRYILDTSAILLDVMELID RGEDRAEIAHAAQKAVAEGLAEMAVLAADDAGVKCIGGTGGVFYNEAISLAVRDYVTERGYRFIQHRNSCAGDGSVSLGQ AVAVALRYR
Sequences:
>Translated_729_residues MGNMVEIVLEGSHEGIEEFIERLKKDKPPISRINSIKKDIFEVNEASFTEFIIKESSSSSSGTSVIPADVATCSSCLEEM MDENNRRYLYPFTACTDCGPRFTVIESIPYDRERTSMRDFPLCSSCMEEYLNPLDRRYHAEATCCPICGPKPFLYRDGIL KTHDPIKMAAELLDDGSILAVKGIGGTHLVCRADDDEVVKRLRSGLGRPNQPFACMSPDLESIESYASISDVEEEALTSR RRPIVVLKKSRDYCLAPSVAPGLHNIGVMLPYSGLHHVLLRYTEAPAYVMTSANRPGDPMFIENTEIIGGLQGIADYFLL HDRRIVNRCDDSVVRFRGGEMAFIRRSRGYAPEPYEIPHVAGDVSAICLGPELDVTFSVLKGGQCYVSQHIGNTSRYDTL LFLKDAVDYLMGITGTEDVDVIACDLHPQFLTTSYAEELASRFSAEVLRVQHHHAHALALMLDAGVDECICIAADGVGYG DDGTSWGGEILHCHGSDYERLGSLMPQRMPGGDLATRYPARMLLSMLRGRYEGDLQELFSERYSDYFPHGEREIGVVMRQ LESGLNTGISTGTGRVLDAISAALRICGVRTYEGECAMKLESEAFRASGKLSMPFEVKEKGGRYILDTSAILLDVMELID RGEDRAEIAHAAQKAVAEGLAEMAVLAADDAGVKCIGGTGGVFYNEAISLAVRDYVTERGYRFIQHRNSCAGDGSVSLGQ AVAVALRYR >Mature_728_residues GNMVEIVLEGSHEGIEEFIERLKKDKPPISRINSIKKDIFEVNEASFTEFIIKESSSSSSGTSVIPADVATCSSCLEEMM DENNRRYLYPFTACTDCGPRFTVIESIPYDRERTSMRDFPLCSSCMEEYLNPLDRRYHAEATCCPICGPKPFLYRDGILK THDPIKMAAELLDDGSILAVKGIGGTHLVCRADDDEVVKRLRSGLGRPNQPFACMSPDLESIESYASISDVEEEALTSRR RPIVVLKKSRDYCLAPSVAPGLHNIGVMLPYSGLHHVLLRYTEAPAYVMTSANRPGDPMFIENTEIIGGLQGIADYFLLH DRRIVNRCDDSVVRFRGGEMAFIRRSRGYAPEPYEIPHVAGDVSAICLGPELDVTFSVLKGGQCYVSQHIGNTSRYDTLL FLKDAVDYLMGITGTEDVDVIACDLHPQFLTTSYAEELASRFSAEVLRVQHHHAHALALMLDAGVDECICIAADGVGYGD DGTSWGGEILHCHGSDYERLGSLMPQRMPGGDLATRYPARMLLSMLRGRYEGDLQELFSERYSDYFPHGEREIGVVMRQL ESGLNTGISTGTGRVLDAISAALRICGVRTYEGECAMKLESEAFRASGKLSMPFEVKEKGGRYILDTSAILLDVMELIDR GEDRAEIAHAAQKAVAEGLAEMAVLAADDAGVKCIGGTGGVFYNEAISLAVRDYVTERGYRFIQHRNSCAGDGSVSLGQA VAVALRYR
Specific function: Along with hypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carb
COG id: COG0068
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YrdC-like domain [H]
Homologues:
Organism=Escherichia coli, GI2367152, Length=733, Percent_Identity=35.8799454297408, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001792 - InterPro: IPR017968 - InterPro: IPR004421 - InterPro: IPR017945 - InterPro: IPR006070 - InterPro: IPR011125 [H]
Pfam domain/function: PF00708 Acylphosphatase; PF01300 Sua5_yciO_yrdC; PF07503 zf-HYPF [H]
EC number: NA
Molecular weight: Translated: 80244; Mature: 80113
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS51160 ACYLPHOSPHATASE_3 ; PS51163 YRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNMVEIVLEGSHEGIEEFIERLKKDKPPISRINSIKKDIFEVNEASFTEFIIKESSSSS CCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC SGTSVIPADVATCSSCLEEMMDENNRRYLYPFTACTDCGPRFTVIESIPYDRERTSMRDF CCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCHHCCCCCC PLCSSCMEEYLNPLDRRYHAEATCCPICGPKPFLYRDGILKTHDPIKMAAELLDDGSILA CHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEE VKGIGGTHLVCRADDDEVVKRLRSGLGRPNQPFACMSPDLESIESYASISDVEEEALTSR EECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHC RRPIVVLKKSRDYCLAPSVAPGLHNIGVMLPYSGLHHVLLRYTEAPAYVMTSANRPGDPM CCCEEEEECCCCEEECCCCCCCHHHCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCE FIENTEIIGGLQGIADYFLLHDRRIVNRCDDSVVRFRGGEMAFIRRSRGYAPEPYEIPHV EEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEECCCCCCCCCCCCCCC AGDVSAICLGPELDVTFSVLKGGQCYVSQHIGNTSRYDTLLFLKDAVDYLMGITGTEDVD CCCCEEEEECCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE VIACDLHPQFLTTSYAEELASRFSAEVLRVQHHHAHALALMLDAGVDECICIAADGVGYG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DDGTSWGGEILHCHGSDYERLGSLMPQRMPGGDLATRYPARMLLSMLRGRYEGDLQELFS CCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ERYSDYFPHGEREIGVVMRQLESGLNTGISTGTGRVLDAISAALRICGVRTYEGECAMKL HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCEEEEE ESEAFRASGKLSMPFEVKEKGGRYILDTSAILLDVMELIDRGEDRAEIAHAAQKAVAEGL HHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEMAVLAADDAGVKCIGGTGGVFYNEAISLAVRDYVTERGYRFIQHRNSCAGDGSVSLGQ HHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AVAVALRYR HHHHHHCCC >Mature Secondary Structure GNMVEIVLEGSHEGIEEFIERLKKDKPPISRINSIKKDIFEVNEASFTEFIIKESSSSS CCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC SGTSVIPADVATCSSCLEEMMDENNRRYLYPFTACTDCGPRFTVIESIPYDRERTSMRDF CCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCHHCCCCCC PLCSSCMEEYLNPLDRRYHAEATCCPICGPKPFLYRDGILKTHDPIKMAAELLDDGSILA CHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEE VKGIGGTHLVCRADDDEVVKRLRSGLGRPNQPFACMSPDLESIESYASISDVEEEALTSR EECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHC RRPIVVLKKSRDYCLAPSVAPGLHNIGVMLPYSGLHHVLLRYTEAPAYVMTSANRPGDPM CCCEEEEECCCCEEECCCCCCCHHHCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCE FIENTEIIGGLQGIADYFLLHDRRIVNRCDDSVVRFRGGEMAFIRRSRGYAPEPYEIPHV EEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEECCCCCCCCCCCCCCC AGDVSAICLGPELDVTFSVLKGGQCYVSQHIGNTSRYDTLLFLKDAVDYLMGITGTEDVD CCCCEEEEECCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE VIACDLHPQFLTTSYAEELASRFSAEVLRVQHHHAHALALMLDAGVDECICIAADGVGYG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DDGTSWGGEILHCHGSDYERLGSLMPQRMPGGDLATRYPARMLLSMLRGRYEGDLQELFS CCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ERYSDYFPHGEREIGVVMRQLESGLNTGISTGTGRVLDAISAALRICGVRTYEGECAMKL HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCEEEEE ESEAFRASGKLSMPFEVKEKGGRYILDTSAILLDVMELIDRGEDRAEIAHAAQKAVAEGL HHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEMAVLAADDAGVKCIGGTGGVFYNEAISLAVRDYVTERGYRFIQHRNSCAGDGSVSLGQ HHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AVAVALRYR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]