| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679275
GI number: 15679275
Start: 1155786
End: 1157225
Strand: Direct
Name: Not Available
Synonym: MTH1264
Alternate gene names: 15679275
Gene position: 1155786-1157225 (Clockwise)
Preceding gene: 15679274
Following gene: 15679276
Centisome position: 65.99
GC content: 50.28
Gene sequence:
>1440_bases TTGGTACTTATGAGATACGTTGGAAAGCGGGACCTTTTTACAGTGGGCAAGTATCTTGGCACGATAATGCAGGGAGTGGG TTTTGTTGTTGCACTGCCAGTCTTCGTTGCCATCATCTACGGTGAGGGCAACCTGCAGAGTTTCATTATACCTGCATTCA TTTCTCTGGGTGCAGGGACCGTCCTGAAGAGGTACCTGCCCGAGGAATGTTCAGTGCGCCTCAAGCACGGGATGATGGTT GCATGCCTGGCATGGCTATGGGCAGGGCTCATCGGGAGCCTCATAATGATATCTGCCCTCAACATTGACTTTACAAACGC ATTCTTTGAGAACATGTCTGCATGGACAGGAAGCGGGCTCACCATATTCTCCAGTGTAGAATCCCTCCCTAAATCCATAC TGTTTTTAAGAAGCCTTGAGCAGTGGATAGGGGGCCTTGGTGTGGTCATAGTTGTTATAGGAATACTCATAAGGCCCGGT ACCGCTGCATCGCGTCTCTACAAGTCCGAGGCCAGGGATGAAAGAATAAAGCCCAGCATAGCAAATACAGTTAAGACCAT CTGGTGGATCTACATAACCTACACCGTTCTCGGGATCGTCCTCTACGGCCTCACAGGGATGCCCCTCTTTGACGCCATCA ACAATACCCTGACAAATCTGTCCACCGGTGGGATGTCAATTAAGAACATGAACATAGGATACTATCACAGCGCCGCCGTT TACCTTGTAACCATGCTCCTCATGATACTGGGAGGTACGAGTTTCCTTGTCCACTATCAGCTCATAAAGGGCAGGTTTTT CAGTGTGCTTCATGATATACAGTTACAGGCCACCGTGGTCTTTATAAGCATCTTCACCATCCTTGCAGTCTACGTCGGGG GTGTTGCCCCTCTGGAGTCCATCTACCATGTTATATCGGCACTGAGCTGTACCGGTTCAAGCATAAGTTCAACCCCCCAG ATGGTGGCATGGCCGGCATACTTCAAGGTTTTGCTCATAACCTGTATGCTCATAGGAATGGCTGCCGGTTCAACCACCGG GGCCGTCAAGATAATCAGGGTGATAACCGTCCTCAAGGGGGTTTACTGGGAGATCATGCGAATACTCGCCCCTGAGGGAT CAGTTATGCCAAGGAAGATATCAGGGAAGTCTGTGAGTGACACCGAGATAAGGGAGGCGGGTTCCTATATAAGCCTCTAC TTTGTCCTTCTATTCTTCACATGGTCGGTCCTTGTGGTCTACGGTTATGACCCCCTAAATTCACTCTTTGAGGCCGCCTC TGCCCAGGGAAACGTGGGGCTCAGCATGGGTATAACCAGCTTCAATTTACCCGTCGTCCCGAAGATGGCCCTCATCCTGA GCATGTGGCTTGGAAGGCTTGAGATAATCCCTGTAATTGTGCTTATACGGGGCCTTGTGGAGGCATTCAAGGCAGGCTGA
Upstream 100 bases:
>100_bases CTCTAAAAACCTATATTGCAATATCCTGACGCTACTCAACTACTATCCACCCATAACCTGCCGCTCTAAAAATTTATATT GCAATGTTCCCATTCATATA
Downstream 100 bases:
>100_bases TGCTCAACCCATAAAAAATGATCTGGAGTTACTGAAACCCTTATTATAAGTGGAAAAACCTTATTAATGATGAGGTTTAA CACAAGTAAACACCACTTAC
Product: TRK system potassium uptake protein TrkH
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MVLMRYVGKRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGNLQSFIIPAFISLGAGTVLKRYLPEECSVRLKHGMMV ACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSGLTIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPG TAASRLYKSEARDERIKPSIANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAAV YLVTMLLMILGGTSFLVHYQLIKGRFFSVLHDIQLQATVVFISIFTILAVYVGGVAPLESIYHVISALSCTGSSISSTPQ MVAWPAYFKVLLITCMLIGMAAGSTTGAVKIIRVITVLKGVYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLY FVLLFFTWSVLVVYGYDPLNSLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLIRGLVEAFKAG
Sequences:
>Translated_479_residues MVLMRYVGKRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGNLQSFIIPAFISLGAGTVLKRYLPEECSVRLKHGMMV ACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSGLTIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPG TAASRLYKSEARDERIKPSIANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAAV YLVTMLLMILGGTSFLVHYQLIKGRFFSVLHDIQLQATVVFISIFTILAVYVGGVAPLESIYHVISALSCTGSSISSTPQ MVAWPAYFKVLLITCMLIGMAAGSTTGAVKIIRVITVLKGVYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLY FVLLFFTWSVLVVYGYDPLNSLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLIRGLVEAFKAG >Mature_479_residues MVLMRYVGKRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGNLQSFIIPAFISLGAGTVLKRYLPEECSVRLKHGMMV ACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSGLTIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPG TAASRLYKSEARDERIKPSIANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAAV YLVTMLLMILGGTSFLVHYQLIKGRFFSVLHDIQLQATVVFISIFTILAVYVGGVAPLESIYHVISALSCTGSSISSTPQ MVAWPAYFKVLLITCMLIGMAAGSTTGAVKIIRVITVLKGVYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLY FVLLFFTWSVLVVYGYDPLNSLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLIRGLVEAFKAG
Specific function: Low-Affinity Potassium Transport System. Interacts With Trk System Potassium Uptake Protein Trka. Trke Increases The Affinity Of The System. [C]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=420, Percent_Identity=32.1428571428571, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI48994987, Length=459, Percent_Identity=27.6688453159041, Blast_Score=174, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52242; Mature: 52242
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMRYVGKRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGNLQSFIIPAFISLGAGT CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH VLKRYLPEECSVRLKHGMMVACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSGL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH TIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPGTAASRLYKSEARDERIKPSI HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH ANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAAV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH YLVTMLLMILGGTSFLVHYQLIKGRFFSVLHDIQLQATVVFISIFTILAVYVGGVAPLES HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IYHVISALSCTGSSISSTPQMVAWPAYFKVLLITCMLIGMAAGSTTGAVKIIRVITVLKG HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLYFVLLFFTWSVLVVYGYDPLN HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH SLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLIRGLVEAFKAG HHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVLMRYVGKRDLFTVGKYLGTIMQGVGFVVALPVFVAIIYGEGNLQSFIIPAFISLGAGT CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH VLKRYLPEECSVRLKHGMMVACLAWLWAGLIGSLIMISALNIDFTNAFFENMSAWTGSGL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH TIFSSVESLPKSILFLRSLEQWIGGLGVVIVVIGILIRPGTAASRLYKSEARDERIKPSI HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH ANTVKTIWWIYITYTVLGIVLYGLTGMPLFDAINNTLTNLSTGGMSIKNMNIGYYHSAAV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH YLVTMLLMILGGTSFLVHYQLIKGRFFSVLHDIQLQATVVFISIFTILAVYVGGVAPLES HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IYHVISALSCTGSSISSTPQMVAWPAYFKVLLITCMLIGMAAGSTTGAVKIIRVITVLKG HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VYWEIMRILAPEGSVMPRKISGKSVSDTEIREAGSYISLYFVLLFFTWSVLVVYGYDPLN HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH SLFEAASAQGNVGLSMGITSFNLPVVPKMALILSMWLGRLEIIPVIVLIRGLVEAFKAG HHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]