Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

Click here to switch to the map view.

The map label for this gene is ubiA

Identifier: 15678897

GI number: 15678897

Start: 797924

End: 798793

Strand: Direct

Name: ubiA

Synonym: MTH877

Alternate gene names: NA

Gene position: 797924-798793 (Clockwise)

Preceding gene: 15678896

Following gene: 15678899

Centisome position: 45.56

GC content: 51.03

Gene sequence:

>870_bases
ATGACGGGTCATCTATATGAAACGGGGTTTCTGAAAAAGGCGGTGTTTTTAAGGCAGTTGATTTTTGCCCTGAAAAATCT
TTTCATCCACGGTGGTTTTCTTCCGGCGCTCTGGGGGCCCTCGCTTCTTCTGGTATCAACGGTTCTCCTTGAAAGTCGCT
GCGGCCCCTTAACCTGGGGGATATGCTTCATGCTGCCCCTTACAGTCTACGCCTACGATTACCTTGCTGACCTTGAGCTG
GACTCCCTAACGAATTCTGATAGATCAGAATTCAACCATAAATGGGGTGAATGGCTGCTGGCAGCCTATGCAGGAGCTCT
TCTGGCGCTGCTGCTTCTCTGCATGGATCCACTGATCACGGTCCTCACAGCTTCAATGTTCATTACCGGGATCCTCTACT
CAAGATTCTTCAAGGGGCTCACAGCATACCTGACGGGATTCAAAAACATCTATCTGGGCCTTGTATGGAGTTCATGGACA
ACCATACCTGCAATGGGTGGCAGATCCCTCCCTGCACATATCCTGGTGTTCACATTCATATTCCTCAAGGTATACGTAAA
CACTGCCTTCAGCGACTACAAGGACATTGAATCGGACGCCATGAGGGGCCTCAAGACTCTCCCTGCGGTCTTCGGTGAGA
ATAACAGCTTAATGATACTACAGCTCCTCAATGCGCTGGGTGCAGCCACCCTCAGCCTTGGAGTGCTCACGGGACTCATC
CCAGGCATAGGTGCTGTTGCTGTGATCCTCTCATCATACACGGCCCTTTACCTGCATCTGAAGCCGGTCATGGATGTAAA
AACAGCTACACTCATAGCGGATCTTGAGGGGCCCCTTCACCTCCTCCTTGGTCTGGGGGTCATGATGTGA

Upstream 100 bases:

>100_bases
GCATTATCTGAAAATTAATCATGGATCTGACCGGTAAGATGAACATTTTTTTCTGAGCTGGGGAGTATTAATAACCTTTC
ATTACCCCATAGTTAATACT

Downstream 100 bases:

>100_bases
AATTTTAGATCCCATAGAATACAGCGCCTCCACAGCCATGACAAAAAGGGATCTGATCCTTCACCGTACGCTGAATCACA
GAATTGTCAGGAATCAGGGG

Product: prenyltransferase

Products: NA

Alternate protein names: Prenyltransferase-Related Protein

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTGHLYETGFLKKAVFLRQLIFALKNLFIHGGFLPALWGPSLLLVSTVLLESRCGPLTWGICFMLPLTVYAYDYLADLEL
DSLTNSDRSEFNHKWGEWLLAAYAGALLALLLLCMDPLITVLTASMFITGILYSRFFKGLTAYLTGFKNIYLGLVWSSWT
TIPAMGGRSLPAHILVFTFIFLKVYVNTAFSDYKDIESDAMRGLKTLPAVFGENNSLMILQLLNALGAATLSLGVLTGLI
PGIGAVAVILSSYTALYLHLKPVMDVKTATLIADLEGPLHLLLGLGVMM

Sequences:

>Translated_289_residues
MTGHLYETGFLKKAVFLRQLIFALKNLFIHGGFLPALWGPSLLLVSTVLLESRCGPLTWGICFMLPLTVYAYDYLADLEL
DSLTNSDRSEFNHKWGEWLLAAYAGALLALLLLCMDPLITVLTASMFITGILYSRFFKGLTAYLTGFKNIYLGLVWSSWT
TIPAMGGRSLPAHILVFTFIFLKVYVNTAFSDYKDIESDAMRGLKTLPAVFGENNSLMILQLLNALGAATLSLGVLTGLI
PGIGAVAVILSSYTALYLHLKPVMDVKTATLIADLEGPLHLLLGLGVMM
>Mature_288_residues
TGHLYETGFLKKAVFLRQLIFALKNLFIHGGFLPALWGPSLLLVSTVLLESRCGPLTWGICFMLPLTVYAYDYLADLELD
SLTNSDRSEFNHKWGEWLLAAYAGALLALLLLCMDPLITVLTASMFITGILYSRFFKGLTAYLTGFKNIYLGLVWSSWTT
IPAMGGRSLPAHILVFTFIFLKVYVNTAFSDYKDIESDAMRGLKTLPAVFGENNSLMILQLLNALGAATLSLGVLTGLIP
GIGAVAVILSSYTALYLHLKPVMDVKTATLIADLEGPLHLLLGLGVMM

Specific function: Unknown

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31654; Mature: 31523

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TGHLYETGFLKKAVFLRQLIFALKNLFIHGGFLPALWGPSLLLVSTVLLESRCGPLTWG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHH
ICFMLPLTVYAYDYLADLELDSLTNSDRSEFNHKWGEWLLAAYAGALLALLLLCMDPLIT
HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTASMFITGILYSRFFKGLTAYLTGFKNIYLGLVWSSWTTIPAMGGRSLPAHILVFTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
FLKVYVNTAFSDYKDIESDAMRGLKTLPAVFGENNSLMILQLLNALGAATLSLGVLTGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PGIGAVAVILSSYTALYLHLKPVMDVKTATLIADLEGPLHLLLGLGVMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA