Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15678788

GI number: 15678788

Start: 691108

End: 693297

Strand: Direct

Name: Not Available

Synonym: MTH763

Alternate gene names: NA

Gene position: 691108-693297 (Clockwise)

Preceding gene: 15678784

Following gene: 15678793

Centisome position: 39.46

GC content: 51.64

Gene sequence:

>2190_bases
ATGAGGAATACCATGATTCAGTCATGTAATGAATGTAAGGGTAAAGGTTACCGTGTTAAGAGTTACAAGATATGCAGCGC
ATGCCATGGAACAGGTTTCAGATCAACAGAGGATATAAAGGATCATTTCAAGGGTGTTTCAAACAGTGCAAGGCAGAGGT
TCGACCTCGAGGACTCCCATGAGGTCCCCTGTGAGGTATGCAGGGGTAAGGGTGAGGTGGAGGTGAGGGAAACCTGCCCC
ACCTGTGGCGGTAAGGGTGAGGTTAACATCTGCCCATCATGTGGAAGGATGATGAAGGGTAGGGATGAGTACTGCCCGGA
ATGTCAGAAGAAGGAGAAGGTCTACATCCTCCACCCTGCATGCACAATGGACGACCTCGAGGTTGGAAGCATATACCGTG
GGAAGATAACCAGGGTTGAAAAATATGGGGTCTTTGTGAGCCTCAACAGCCACGTCTGGGGACTCATGAGGGGATTGTTC
CCAGACTACAAGGTGGGGGATGAACTATTCGTCAGGGTATCCCAGGTGAAACCCTACAAGGGCGAGGTGGACATGATCCC
GGCCAGTATAAAGGGGCCCTACGAGGTTATCAAGTTAAAGAAGGACCTGCCAAGGACGAGGATAGCAGACATAGATACAA
AGAGCCTTGGTAAAACCGTGCGGATAGTGGGGGAGGTCATTCAGATCCAGCAGACATCCGGTCCAACCATATTCACGGTA
TCCGATGAAACCGGGACCACATGGGCTGCGGCCTTCGATGAGCCAGGTATAAGGGTCTACCCCCACATACAGATCGGCCA
CATAGTTGAGGTTATAGGAGAGGTTAACCAGCACACAGGAAAGATTCAGATCGAATCCGAGTCAATTGAACGCCTCATAG
GTAATGAAGCTGCGGAAGCCAGGCGGCTCATCGATGAGGCCATAGACAGGAGGGCTGAACCAGAAAGAAAGGACCTCTTA
ATTGAAAGCGAAACCCTGGAAAAATTAAGACCAAAACTTGTGGAGGCGGCCAAGGCAATAAGGAGGGCCGTCTATGATGG
AAGATCCATCCTTGTGAGGCACCATGCAGACGCTGATGGTATCTGTGCCGGTGTTGCCATTGAAAAGGCTGTTTTACCCC
TCCTCCGTGACCTCAACCCCAGCACAGATGCTGAGTGGCACTACTTCAAGAGGGCCCCCAGCAAGGCACCCTTCTATGAA
CTCGAGGACGTTGTGAAGGACCTCTCATATGCCCTGGAGGACCTCGAGAGGCACGGGCAGAAACTGCCGCTCCTTGTACT
GCTTGATAACGGGTCGACAGAGGAGGATATACTTGCCCTCATGAAGGCCAAGATATATGACATTGAAATCGTGGTTGTGG
ACCACCACTACCCTGGCGAGGTCCAGGATGGACGTGTTGAGGTTGATGAATATGTTGACACCCACGTGAATCCATACCTG
GTCGGTGGCGACTCCCAGATAACTGCGGGGTCGCTGTCAGTGGAGATAGCCAAGATGATAAACCCTGAAATTGCAGAGAG
GATTCTCCATCTCCCTGGTATCGCTGCGGTTGGTGACCATGCGAACTCCCCTGAGGCCGAGGCCTACATTGAACTTGCAG
CAGAGCGCGGCTATGAAAGGGAGGACCTTGAAAGGATCGCCGCATGTATAGACTTCGAGGCCTTCTACCTCAGGTTCATG
AACGGGAGGGGCATCATCGACACCATACTTGGGCTTGGAAGTCTTGATAAACACAAGAAACTGGTTGATGCGCTCTACAG
GGAATACGAGAGGAAGGTTGACACCCAGCTCAGGGCAGCCATACCCAACCTCAAATCCACAAGGCTGCCCAACGGGATAC
TCTTCAATGTCCTGGATGTTGAGAAGTACTCACACCGCTTCACATTCCCTGCCCCGGGGAAGACCTGTGGATTCGTCCAT
GATTACATGGTCCAGAAGCATGGTGAGGACACACCCATAATCACCCTGGCCTACGGACCTGACTTCGGTGTTATAAGGGC
CACTGATGCTGTCAATGAGAAATTTGGATTTAACCTCAACGAGATAGTCTGGGAACTCGCAGAGGAGATCCCAGAGGCAG
TGATAGATGGTGGTGGCCATGAATGTGCCGGTTCACTCAAGTATATTGAGGGACTCTCAAAGAAGGTGCTATCAGCCTTT
GCAGAGAAGGTTGCAGCCCTTAAGGGGTGA

Upstream 100 bases:

>100_bases
GATCAAACATTCATAACCTCCCTCTCAGGGCACACAAATATATATGGATTCCAGTTTAATATAATAAACCTAACATTTAT
CATTTAAATAAATCGTTTCT

Downstream 100 bases:

>100_bases
TCCCTCTGACCACTAAATAAGATTGAAACAGGGCATGGAGCCATGAGTGGCGTTAAATTTTCTGGAGCATGGCCTAAACT
TTCTTTTTGCCCTCTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP
TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF
PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV
SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL
IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE
LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL
VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM
NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH
DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF
AEKVAALKG

Sequences:

>Translated_729_residues
MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP
TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF
PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV
SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL
IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE
LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL
VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM
NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH
DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF
AEKVAALKG
>Mature_729_residues
MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP
TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF
PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV
SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL
IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE
LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL
VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM
NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH
DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF
AEKVAALKG

Specific function: Unknown

COG id: COG1107

COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001305
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365
- InterPro:   IPR001667
- InterPro:   IPR003029
- InterPro:   IPR022967 [H]

Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 81319; Mature: 81319

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSH
CCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC
EVPCEVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPA
CCCHHHHCCCCCEEEHHCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCC
CTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLFPDYKVGDELFVRVSQVKPYK
CCCCCCCCCCEECCCEEEEEECEEEEEECCHHHHHHHHCCCCCCCCHHHHEEHHHCCCCC
GEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV
CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEE
SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEA
ECCCCCEEEEECCCCCCEEECCEEHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHH
RRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADG
HHHHHHHHHCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
ICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYALEDLERHGQ
EEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL
CCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCCCEEE
VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYER
ECCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCH
EDLERIAACIDFEAFYLRFMNGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGEDTPIITLAYGP
CCCCCCCCCCCCEEEEEEEHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC
DFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF
CCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AEKVAALKG
HHHHHHCCC
>Mature Secondary Structure
MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSH
CCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC
EVPCEVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPA
CCCHHHHCCCCCEEEHHCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCC
CTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLFPDYKVGDELFVRVSQVKPYK
CCCCCCCCCCEECCCEEEEEECEEEEEECCHHHHHHHHCCCCCCCCHHHHEEHHHCCCCC
GEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV
CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEE
SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEA
ECCCCCEEEEECCCCCCEEECCEEHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHH
RRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADG
HHHHHHHHHCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
ICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYALEDLERHGQ
EEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
KLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL
CCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCCCEEE
VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYER
ECCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCH
EDLERIAACIDFEAFYLRFMNGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGEDTPIITLAYGP
CCCCCCCCCCCCEEEEEEEHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC
DFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF
CCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AEKVAALKG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]