| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678441
GI number: 15678441
Start: 350222
End: 350614
Strand: Direct
Name: Not Available
Synonym: MTH413
Alternate gene names: NA
Gene position: 350222-350614 (Clockwise)
Preceding gene: 15678439
Following gene: 15678442
Centisome position: 20.0
GC content: 47.07
Gene sequence:
>393_bases ATGATGACACCCGAGATGATGGATGCAATTGAAAAGGAGCTGGTTTTTGTTGCAACTGCAGATGAGGAAGGAACCCCCAA TGTTGTTCCAATAGGCTTCGCCAGACCCCTGGATGAGAGGACCATCCTCATCGCAGACAACTACATGAAAAAAACCATAA GGAACCTCCACGAAAACCCCAGAATAGCACTGATACCACAGAACGCAAGGGAATGCCCCTACCAGTTCAAGGGAACAGTT GAAATATTTAAATCCGGAAAATACTTTGACATGGTCGTTGAGTGGGCACAGAACGTAATGACAGAACTTGAACCAAAATC AGCCATACTCATGACCGTGGAGGAGATATACTCAGTAAAACCGGGGCCAGAGGCCGGTGAAAAGGTGGCCTGA
Upstream 100 bases:
>100_bases ATTCGCTGTCTTTCTCCTCAGGTTCATGCAGGGATCACCCCCCTTGATTCCGGGTTAAATTTATTACCCCTCCCCGGTAA TAGATAAACGGTGATATAAT
Downstream 100 bases:
>100_bases GCTCACAGAAGTGACCGCGATGTGCGCCATTGCAGGGTTCAGGGGTGATGACGCCCCGGTAAAGGTACAGGAGATGTTAG ATGTCCTCAGACACCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MMTPEMMDAIEKELVFVATADEEGTPNVVPIGFARPLDERTILIADNYMKKTIRNLHENPRIALIPQNARECPYQFKGTV EIFKSGKYFDMVVEWAQNVMTELEPKSAILMTVEEIYSVKPGPEAGEKVA
Sequences:
>Translated_130_residues MMTPEMMDAIEKELVFVATADEEGTPNVVPIGFARPLDERTILIADNYMKKTIRNLHENPRIALIPQNARECPYQFKGTV EIFKSGKYFDMVVEWAQNVMTELEPKSAILMTVEEIYSVKPGPEAGEKVA >Mature_130_residues MMTPEMMDAIEKELVFVATADEEGTPNVVPIGFARPLDERTILIADNYMKKTIRNLHENPRIALIPQNARECPYQFKGTV EIFKSGKYFDMVVEWAQNVMTELEPKSAILMTVEEIYSVKPGPEAGEKVA
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 14707; Mature: 14707
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPEMMDAIEKELVFVATADEEGTPNVVPIGFARPLDERTILIADNYMKKTIRNLHENP CCCHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCC RIALIPQNARECPYQFKGTVEIFKSGKYFDMVVEWAQNVMTELEPKSAILMTVEEIYSVK CEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHCCC PGPEAGEKVA CCCCCCCCCC >Mature Secondary Structure MMTPEMMDAIEKELVFVATADEEGTPNVVPIGFARPLDERTILIADNYMKKTIRNLHENP CCCHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCC RIALIPQNARECPYQFKGTVEIFKSGKYFDMVVEWAQNVMTELEPKSAILMTVEEIYSVK CEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHEEHHHHHCCC PGPEAGEKVA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]