| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678432
GI number: 15678432
Start: 341953
End: 342849
Strand: Direct
Name: Not Available
Synonym: MTH404
Alternate gene names: 15678432
Gene position: 341953-342849 (Clockwise)
Preceding gene: 15678431
Following gene: 15678433
Centisome position: 19.52
GC content: 57.97
Gene sequence:
>897_bases ATGAGGTTCGATGCGGTGGGCCTTGGAGCCCTCAACATGGACCAGCTCCACATGGTTGAGAGGATAGCAGGCCCGGATGA GGAGACCTTCGTGAGGGGGCTCGTGGAATCCTGTGGGGGCTCAGCAGCCAACACCATGATAGGCCTCTCAAGGCTCGGTC TCAGGACAGCCCACATAGGTAAGGTCGCCGATGACAGGGAGGGGGGACTCCTCAGGAGTAACCTCTCATCTGAGGGGGTC ACGGATTTCACCGTCGTAGCGGATACAGGTAGAAGCGGCCGTGTGATGGGCTTCGTTGACCCTGACGGTAACAGGGCCCT CTACGTTGACCCTGGAGTCAACGACACACTCAGGGTGGATGAGGTGGCTGATGAGGCCCTTAACACAGAACTGCTGCACC TCACATCCTTCGCAGGTGATGGCATAAATGTCCAGGTGGAAGTCATTGAGGCACTGGATGAATCCGTGACCGTCAGCCTG GATCCAGGACACATCTACGCCTCAAGGGGAGTATCTGAGCTGTCAGATATCCTCGAGCGCACCGACATCCTCCTCACAAA CCAGAGGGAACTTGAGCTGATGACAGGGTCCGCTGACCCTGAGGAGGCAGCATCACTCCTGGGAATCGGGGTGGTTGTGG TTAAGATGGGCGCCCGAGGCGTCAGGGCATGGGACGGTGAGTCTGTGATGGTGGATGCACTGAGCACCGAATGTGTTGAT ACGACGGGGGCCGGTGACGCCTTCAATGCTGGCTTCATATATGCCTGGCTCGAGGGCTTTGGCCTTGAGGTTTCATGCCG TTTTGGAAACTACATAGCATCACGGTGTATCGGAGGATACGGTGCCACAGAATCCCTCCCCGGGACCGGCCCTGGATGTC CTCAGGAGGTACGCTGA
Upstream 100 bases:
>100_bases TAGAGGCTGTCTGCAGGTACGATGGGGTCCTGAGGGTATCTGCAGGTAACTATGACGGTAAACTGGGGGACCACAGGATA GACCTACACGGTGTTCTGGG
Downstream 100 bases:
>100_bases GGGTTGATCTTTAATGTGCTGGATCCGGGAATCTGGGTGTGCTGAGGCCTGATGTTGATCCCGTGAACCGGAAAAAAATT TAAGTAAATACGTTTAAAAG
Product: ribokinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIGKVADDREGGLLRSNLSSEGV TDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVDEVADEALNTELLHLTSFAGDGINVQVEVIEALDESVTVSL DPGHIYASRGVSELSDILERTDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECVD TTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESLPGTGPGCPQEVR
Sequences:
>Translated_298_residues MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIGKVADDREGGLLRSNLSSEGV TDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVDEVADEALNTELLHLTSFAGDGINVQVEVIEALDESVTVSL DPGHIYASRGVSELSDILERTDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECVD TTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESLPGTGPGCPQEVR >Mature_298_residues MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIGKVADDREGGLLRSNLSSEGV TDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVDEVADEALNTELLHLTSFAGDGINVQVEVIEALDESVTVSL DPGHIYASRGVSELSDILERTDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECVD TTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESLPGTGPGCPQEVR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=257, Percent_Identity=28.7937743190661, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790193, Length=295, Percent_Identity=28.4745762711864, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: 2.7.1.15
Molecular weight: Translated: 31407; Mature: 31407
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIG CCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCC KVADDREGGLLRSNLSSEGVTDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVD CCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEHH EVADEALNTELLHLTSFAGDGINVQVEVIEALDESVTVSLDPGHIYASRGVSELSDILER HHHHHHHCCEEEEEEHCCCCCCEEEEEEEECCCCCEEEEECCCEEEHHCCHHHHHHHHHH TDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECVD HHEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCEEECCCEEEEEECCCHHCC TTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESLPGTGPGCPQEVR CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFDAVGLGALNMDQLHMVERIAGPDEETFVRGLVESCGGSAANTMIGLSRLGLRTAHIG CCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCC KVADDREGGLLRSNLSSEGVTDFTVVADTGRSGRVMGFVDPDGNRALYVDPGVNDTLRVD CCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEHH EVADEALNTELLHLTSFAGDGINVQVEVIEALDESVTVSLDPGHIYASRGVSELSDILER HHHHHHHCCEEEEEEHCCCCCCEEEEEEEECCCCCEEEEECCCEEEHHCCHHHHHHHHHH TDILLTNQRELELMTGSADPEEAASLLGIGVVVVKMGARGVRAWDGESVMVDALSTECVD HHEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCEEECCCEEEEEECCCHHCC TTGAGDAFNAGFIYAWLEGFGLEVSCRFGNYIASRCIGGYGATESLPGTGPGCPQEVR CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]