Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15678390

GI number: 15678390

Start: 308608

End: 309825

Strand: Direct

Name: Not Available

Synonym: MTH362

Alternate gene names: NA

Gene position: 308608-309825 (Clockwise)

Preceding gene: 15678389

Following gene: 15678393

Centisome position: 17.62

GC content: 54.02

Gene sequence:

>1218_bases
ATGAGGATTGGACTCATATTACCATCCCTTGATGATAGTGGAGTCGCCAGGGCCGCTGCCAGTCTATCATCTCTTCTATC
AGAGCACCATGAGGTGCACGTGATCACAGTTTACAGACATGAACCCCTGCAGGAGTGGAGTGGCAGTTTCCATGTCCTGG
ACGTCCCCCCTGCCTCTCCAGGGGATGAACTACCCCGGAGGCTTGGACTTTTCATAAGGAGGATACTTGCACTGCGACGC
ATCAAGGCTGAACTTGAACTTGATGTCTCGGTATCCTTCTCAGAGGCCCTCAGCATACAGAACATATTCACAGCCGGCTC
TGACAGACCGGTTGTAAGTCATCACACTGTACTCTCAAGGAATGAGAACCTTGACGATATCTATGGGAGGGGTGTGAAGG
CCCTCGTGAGGCTCACCTATCCCAGGGCGGCTGGAATAATCTGTGTATCCATGGAGTCGGCCACTGACCTCACTGATGCC
TACGGTATCGACCCCCGGCAGGTAGCGGTGATACCAAACCATATAGACGTCGATGCCATTGAGGGGGCTGCTGTTCTACC
GGCAAGGTGGAATGATGTGTTCACCGCACCTGTGATCCTGACCGCTGGAAGGTTGACACATGCCAAGGGCCAGTGGCACC
TTATCAGGGTGTTCGCCAGGCTAAAAGAACTCATACCCGACCTCAAACTGGTCATAATGGGTGATGGGGACCTGAGGGAG
TACCTGCAGGGACTATCAGAGGACCTTGGTCTTAAAACCTTCACCGGTGGCGAGCCAGGTGAATATGACGTTTACTTTGC
TGGATTCCAGAGGAACCCCTATGGTTTCATGGCACATTCAGACCTCTTTGTCCTGCCATCACTGAGGGAGGCACTCCCGC
TTGCCCTGATGGAGGCCATGGCCCTGGGGACGCCTGTTGCAGCCGCAGACTGTGGGGGTCCAAGGGAGATACTTGCCCCC
AGTTCAGATCCATCATTCAAAACCGAGAAGACGGAATTCGCAGATTACGGGGTCCTTCTACCTCCCTTTGATGGTGAAAT
GAGGGCTGCAGATGATGAACTGTGCAGGGAGGAAAGGTTATGGGTCGATACACTCCACGAGATCATCACAGACAGGAAGG
TCCTTGACTCATACTCTGAGCGGGCCAGGGAGAGGGCCTCCAGTTCAGCCCTGATGCCATCAGGAGGAGGTGGCTTGATT
TCCTTGATGCCGTGGTAG

Upstream 100 bases:

>100_bases
CTATTACAGGAGGGAGAGGAGGATCGTGAACAGCCTCGTGAACCAGCACCAGGACGCGGGGTCATCCAGGAGAGTCTATG
AACTGGTCTGGGGTGATTGA

Downstream 100 bases:

>100_bases
ATCAGGGATAAAATGTTTGATGGGATGGATATCAGCCTTTGCCGGTGGCGTCGGGGCTCATCCCGGTGACCTCCAGGATC
AGACGCCTCCACTTCTCCCC

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MRIGLILPSLDDSGVARAAASLSSLLSEHHEVHVITVYRHEPLQEWSGSFHVLDVPPASPGDELPRRLGLFIRRILALRR
IKAELELDVSVSFSEALSIQNIFTAGSDRPVVSHHTVLSRNENLDDIYGRGVKALVRLTYPRAAGIICVSMESATDLTDA
YGIDPRQVAVIPNHIDVDAIEGAAVLPARWNDVFTAPVILTAGRLTHAKGQWHLIRVFARLKELIPDLKLVIMGDGDLRE
YLQGLSEDLGLKTFTGGEPGEYDVYFAGFQRNPYGFMAHSDLFVLPSLREALPLALMEAMALGTPVAAADCGGPREILAP
SSDPSFKTEKTEFADYGVLLPPFDGEMRAADDELCREERLWVDTLHEIITDRKVLDSYSERARERASSSALMPSGGGGLI
SLMPW

Sequences:

>Translated_405_residues
MRIGLILPSLDDSGVARAAASLSSLLSEHHEVHVITVYRHEPLQEWSGSFHVLDVPPASPGDELPRRLGLFIRRILALRR
IKAELELDVSVSFSEALSIQNIFTAGSDRPVVSHHTVLSRNENLDDIYGRGVKALVRLTYPRAAGIICVSMESATDLTDA
YGIDPRQVAVIPNHIDVDAIEGAAVLPARWNDVFTAPVILTAGRLTHAKGQWHLIRVFARLKELIPDLKLVIMGDGDLRE
YLQGLSEDLGLKTFTGGEPGEYDVYFAGFQRNPYGFMAHSDLFVLPSLREALPLALMEAMALGTPVAAADCGGPREILAP
SSDPSFKTEKTEFADYGVLLPPFDGEMRAADDELCREERLWVDTLHEIITDRKVLDSYSERARERASSSALMPSGGGGLI
SLMPW
>Mature_405_residues
MRIGLILPSLDDSGVARAAASLSSLLSEHHEVHVITVYRHEPLQEWSGSFHVLDVPPASPGDELPRRLGLFIRRILALRR
IKAELELDVSVSFSEALSIQNIFTAGSDRPVVSHHTVLSRNENLDDIYGRGVKALVRLTYPRAAGIICVSMESATDLTDA
YGIDPRQVAVIPNHIDVDAIEGAAVLPARWNDVFTAPVILTAGRLTHAKGQWHLIRVFARLKELIPDLKLVIMGDGDLRE
YLQGLSEDLGLKTFTGGEPGEYDVYFAGFQRNPYGFMAHSDLFVLPSLREALPLALMEAMALGTPVAAADCGGPREILAP
SSDPSFKTEKTEFADYGVLLPPFDGEMRAADDELCREERLWVDTLHEIITDRKVLDSYSERARERASSSALMPSGGGGLI
SLMPW

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 44458; Mature: 44458

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGLILPSLDDSGVARAAASLSSLLSEHHEVHVITVYRHEPLQEWSGSFHVLDVPPASP
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCEEEEECCCCCC
GDELPRRLGLFIRRILALRRIKAELELDVSVSFSEALSIQNIFTAGSDRPVVSHHTVLSR
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCEEEHHHHHCC
NENLDDIYGRGVKALVRLTYPRAAGIICVSMESATDLTDAYGIDPRQVAVIPNHIDVDAI
CCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCCCC
EGAAVLPARWNDVFTAPVILTAGRLTHAKGQWHLIRVFARLKELIPDLKLVIMGDGDLRE
CCCEECCCCCCCCEECHHHEECCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
YLQGLSEDLGLKTFTGGEPGEYDVYFAGFQRNPYGFMAHSDLFVLPSLREALPLALMEAM
HHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCCEEECCCEEECCCHHHHHHHHHHHHH
ALGTPVAAADCGGPREILAPSSDPSFKTEKTEFADYGVLLPPFDGEMRAADDELCREERL
HHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCEECCCCCCCCCCCHHHHHHHHH
WVDTLHEIITDRKVLDSYSERARERASSSALMPSGGGGLISLMPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MRIGLILPSLDDSGVARAAASLSSLLSEHHEVHVITVYRHEPLQEWSGSFHVLDVPPASP
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCEEEEECCCCCC
GDELPRRLGLFIRRILALRRIKAELELDVSVSFSEALSIQNIFTAGSDRPVVSHHTVLSR
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCEEEHHHHHCC
NENLDDIYGRGVKALVRLTYPRAAGIICVSMESATDLTDAYGIDPRQVAVIPNHIDVDAI
CCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCCCC
EGAAVLPARWNDVFTAPVILTAGRLTHAKGQWHLIRVFARLKELIPDLKLVIMGDGDLRE
CCCEECCCCCCCCEECHHHEECCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
YLQGLSEDLGLKTFTGGEPGEYDVYFAGFQRNPYGFMAHSDLFVLPSLREALPLALMEAM
HHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCCEEECCCEEECCCHHHHHHHHHHHHH
ALGTPVAAADCGGPREILAPSSDPSFKTEKTEFADYGVLLPPFDGEMRAADDELCREERL
HHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCEECCCCCCCCCCCHHHHHHHHH
WVDTLHEIITDRKVLDSYSERARERASSSALMPSGGGGLISLMPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]