| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678389
GI number: 15678389
Start: 307498
End: 308607
Strand: Direct
Name: Not Available
Synonym: MTH361
Alternate gene names: 15678389
Gene position: 307498-308607 (Clockwise)
Preceding gene: 15678384
Following gene: 15678390
Centisome position: 17.56
GC content: 51.35
Gene sequence:
>1110_bases ATGTCATTGCATGATTCATTCGTCAGGTTTCTGCTGAATTCATGGATTGGAAGAGCCCTTAACCTTATCATGGTTGCCAT AAATCGTCTTGTACCCAAGAGGGACAATCAGATACTCTTTGAAAGCATACCAGATTTTTCAGATAACCCTTCCCAGCTTT ACAGTTACATTAAATCCCTTGGAACAGATTACAGGATGATATGGGTGGTTGACAGTATCAGGGATGACCTCGACGCCCCA CAGTATCTGAGGAACACTCCATCAGAATTCTGGCAGTTCCTGAGGTCAAGGTACATAGTCAGCTCCCACGGCTATCACCT CATGATAAGGGCGGGTAATCAGGTCTACCTCAACCTCTGGCATGGGATGCCCCTGAAGGCAATGGGCTACACAGAAAGGG AGCCATCCATACTGCTCCCGGGGGTATGTGATGAGAACTACTACCTCATCGCAACTTCCACCATAATGAGGAATGCCCTG GCGGCCTGCTTCAACCAGGACGCCCGCAGGATACACATAACAGGTCAGCCAAGGAACGATAAACTCCTCACAGAGGGCAG AACCATGGATGATTCCAGGACCATAATCCTGTACACACCAACCTACCGGGATACCGGGAGGGACGAGTCCATATTCAGCA TGCCGGACTACAGTGAGGAGAAATTTCAGGACTTTCTCAGGGAACATGACGCAGTCTTCCTCATGAAGCTTCACCCACTC GATTCAGGGATCAGGCAGAGGTCCGGGGGTAATATCAGGGCCCTTGACCCGTCAGAGGATCTCTACGACATCCTCCAGGG GGTTGATGTCCTTGTAACCGATTACTCATCGGTCTACTTTGACTTTCTGCTCCTTGACAGGCCTGTGATCTTTGCAGTCC CTGACCTGGAGGAGTACCGGAGGGTCAGGGGTTTTGTCCTGGAGCCCTTCGAGTTCTGGGCCCCGGGTCCCCGTGTTGAA ACCTTCACGGATTTCCTGGAGGAACTTGAAAGGTGTCTTGAGGACGATGACTATTACAGGAGGGAGAGGAGGATCGTGAA CAGCCTCGTGAACCAGCACCAGGACGCGGGGTCATCCAGGAGAGTCTATGAACTGGTCTGGGGTGATTGA
Upstream 100 bases:
>100_bases GGTATACTGGTTATATCCGGGTTACCATTAAATACCTTTACGGTCATGAGGGTGTGTATCTACCGGAGGCCCACCGGGTA TTAATTCATGGAGGATCATA
Downstream 100 bases:
>100_bases ATGAGGATTGGACTCATATTACCATCCCTTGATGATAGTGGAGTCGCCAGGGCCGCTGCCAGTCTATCATCTCTTCTATC AGAGCACCATGAGGTGCACG
Product: teichoic acid biosynthesis protein RodC related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSLHDSFVRFLLNSWIGRALNLIMVAINRLVPKRDNQILFESIPDFSDNPSQLYSYIKSLGTDYRMIWVVDSIRDDLDAP QYLRNTPSEFWQFLRSRYIVSSHGYHLMIRAGNQVYLNLWHGMPLKAMGYTEREPSILLPGVCDENYYLIATSTIMRNAL AACFNQDARRIHITGQPRNDKLLTEGRTMDDSRTIILYTPTYRDTGRDESIFSMPDYSEEKFQDFLREHDAVFLMKLHPL DSGIRQRSGGNIRALDPSEDLYDILQGVDVLVTDYSSVYFDFLLLDRPVIFAVPDLEEYRRVRGFVLEPFEFWAPGPRVE TFTDFLEELERCLEDDDYYRRERRIVNSLVNQHQDAGSSRRVYELVWGD
Sequences:
>Translated_369_residues MSLHDSFVRFLLNSWIGRALNLIMVAINRLVPKRDNQILFESIPDFSDNPSQLYSYIKSLGTDYRMIWVVDSIRDDLDAP QYLRNTPSEFWQFLRSRYIVSSHGYHLMIRAGNQVYLNLWHGMPLKAMGYTEREPSILLPGVCDENYYLIATSTIMRNAL AACFNQDARRIHITGQPRNDKLLTEGRTMDDSRTIILYTPTYRDTGRDESIFSMPDYSEEKFQDFLREHDAVFLMKLHPL DSGIRQRSGGNIRALDPSEDLYDILQGVDVLVTDYSSVYFDFLLLDRPVIFAVPDLEEYRRVRGFVLEPFEFWAPGPRVE TFTDFLEELERCLEDDDYYRRERRIVNSLVNQHQDAGSSRRVYELVWGD >Mature_368_residues SLHDSFVRFLLNSWIGRALNLIMVAINRLVPKRDNQILFESIPDFSDNPSQLYSYIKSLGTDYRMIWVVDSIRDDLDAPQ YLRNTPSEFWQFLRSRYIVSSHGYHLMIRAGNQVYLNLWHGMPLKAMGYTEREPSILLPGVCDENYYLIATSTIMRNALA ACFNQDARRIHITGQPRNDKLLTEGRTMDDSRTIILYTPTYRDTGRDESIFSMPDYSEEKFQDFLREHDAVFLMKLHPLD SGIRQRSGGNIRALDPSEDLYDILQGVDVLVTDYSSVYFDFLLLDRPVIFAVPDLEEYRRVRGFVLEPFEFWAPGPRVET FTDFLEELERCLEDDDYYRRERRIVNSLVNQHQDAGSSRRVYELVWGD
Specific function: Catalyzes the addition of a second single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, to complete the linkage unit (Potential) [H]
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: NA
Molecular weight: Translated: 43284; Mature: 43153
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHDSFVRFLLNSWIGRALNLIMVAINRLVPKRDNQILFESIPDFSDNPSQLYSYIKSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCHHHHHHHHHHH GTDYRMIWVVDSIRDDLDAPQYLRNTPSEFWQFLRSRYIVSSHGYHLMIRAGNQVYLNLW CCCEEEEEEEHHHHHCCCCCHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCEEEEEEE HGMPLKAMGYTEREPSILLPGVCDENYYLIATSTIMRNALAACFNQDARRIHITGQPRND CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCC KLLTEGRTMDDSRTIILYTPTYRDTGRDESIFSMPDYSEEKFQDFLREHDAVFLMKLHPL CEEECCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEEECCC DSGIRQRSGGNIRALDPSEDLYDILQGVDVLVTDYSSVYFDFLLLDRPVIFAVPDLEEYR CHHHHHCCCCCEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEECCCHHHHH RVRGFVLEPFEFWAPGPRVETFTDFLEELERCLEDDDYYRRERRIVNSLVNQHQDAGSSR HHHCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RVYELVWGD EEEEEECCC >Mature Secondary Structure SLHDSFVRFLLNSWIGRALNLIMVAINRLVPKRDNQILFESIPDFSDNPSQLYSYIKSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCHHHHHHHHHHH GTDYRMIWVVDSIRDDLDAPQYLRNTPSEFWQFLRSRYIVSSHGYHLMIRAGNQVYLNLW CCCEEEEEEEHHHHHCCCCCHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCEEEEEEE HGMPLKAMGYTEREPSILLPGVCDENYYLIATSTIMRNALAACFNQDARRIHITGQPRND CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCC KLLTEGRTMDDSRTIILYTPTYRDTGRDESIFSMPDYSEEKFQDFLREHDAVFLMKLHPL CEEECCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEEECCC DSGIRQRSGGNIRALDPSEDLYDILQGVDVLVTDYSSVYFDFLLLDRPVIFAVPDLEEYR CHHHHHCCCCCEEEECCCHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEECCCHHHHH RVRGFVLEPFEFWAPGPRVETFTDFLEELERCLEDDDYYRRERRIVNSLVNQHQDAGSSR HHHCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RVYELVWGD EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]