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Identifier: 15678282

GI number: 15678282

Start: 197684

End: 197902

Strand: Direct

Name: Not Available

Synonym: MTH254

Alternate gene names: 15678282

Gene position: 197684-197902 (Clockwise)

Preceding gene: 15678281

Following gene: 15678283

Centisome position: 11.29

GC content: 40.64

Gene sequence:

>219_bases
ATGAGGTGGTTAATTATGGAATTGCCAATAGCTCCAATTGGAAGAATAATAAAGAATGCCGGTGCAGAAATAGTAAGTGA
TGATGCAAGGGAAGCCCTTGCAAAGGTCCTTGAAGCAAAAGGTGAAGAAATAGCTGAAAACGCTGTTAAACTTGCAAAAC
ACGCTGGAAGGAAGACGGTTAAAGCCTCAGACATTGAACTGGCAGTTAAAAGGATGTAA

Upstream 100 bases:

>100_bases
TGGGTTGAAGGTGCCCCATGAACCAACCGATGGCTCAGAAAAACCTTAAAATTAGCGATATATTTATATAGGATTATATG
AATAGATAATATCACATAAA

Downstream 100 bases:

>100_bases
CTCTCATCTGCATCCATTATTCCTTCCCTTTTTAATTGGCAGCAAAACTTTATATGTGATGAAGCTTTAATTTCTATTAA
TCCTTGTTTTCCTGGGCGTC

Product: histone HMtB

Products: NA

Alternate protein names: Archaeal histone A [H]

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MRWLIMELPIAPIGRIIKNAGAEIVSDDAREALAKVLEAKGEEIAENAVKLAKHAGRKTVKASDIELAVKRM

Sequences:

>Translated_72_residues
MRWLIMELPIAPIGRIIKNAGAEIVSDDAREALAKVLEAKGEEIAENAVKLAKHAGRKTVKASDIELAVKRM
>Mature_72_residues
MRWLIMELPIAPIGRIIKNAGAEIVSDDAREALAKVLEAKGEEIAENAVKLAKHAGRKTVKASDIELAVKRM

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7849; Mature: 7849

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLIMELPIAPIGRIIKNAGAEIVSDDAREALAKVLEAKGEEIAENAVKLAKHAGRKTV
CCEEEEECCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
KASDIELAVKRM
CCCHHHHHHHCC
>Mature Secondary Structure
MRWLIMELPIAPIGRIIKNAGAEIVSDDAREALAKVLEAKGEEIAENAVKLAKHAGRKTV
CCEEEEECCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
KASDIELAVKRM
CCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459937; 9371463 [H]