| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yxaF
Identifier: 15674207
GI number: 15674207
Start: 2308550
End: 2309227
Strand: Reverse
Name: yxaF
Synonym: L91998
Alternate gene names: NA
Gene position: 2309227-2308550 (Counterclockwise)
Preceding gene: 15674208
Following gene: 15674206
Centisome position: 97.62
GC content: 34.51
Gene sequence:
>678_bases ATGACTATTAAAAAGAAAAAACTTTTTAAAAAAAGAATCGTAATTTTATTTGTTCTTGTGGCCTGTCTACTTATTTTTAC TTTAATTGTAAATCCTAAGAATCAAGAAGATAAAAAATTAACATCTGCATCAAAAACTTTTGTCCAAACTGATCGTAAGG GTAAGTACGATTATGTTTTGATGAAAACTGGTGATGTTAATCAAATGACAATCGGAGCCTACCAGGGATGTGAAATTGTT TCTTTTTACAATGCATTGGTCTATTTGGATAAAACTCAGGGTAGGACGGTCACTGATTGGATTGAATCTTTGCCGTATGT GGGTTGGGGAGGTGATCCAGGAAGTGGTTATGCTGGGAATCCTTGGACGTCTGATGAAGACATCCCGGATGGTGGTTTTC CAACGATTTGGCCCACAGCTTTGATGAGTTTTGCTCAAGAAAATAATATCCAAGTTGCTGACTTATCTGGAAAAAGTATT AGCGAGATTAAAGATGCTGTTTTATCAGAACATTTAGTTGAAATGTGGGTGACGATTGATTTTGATGAACCTAATATCAC TTACGATGATTATTACGGTTATAAGGTTGTAGCTAATACGCATGCTGTTATTTTAGATGGGTATAACGAAAAGAAAAATG AGTTTCATGTTACTGATCCAATAAAAGGAAAATATTGA
Upstream 100 bases:
>100_bases TATGAAGCCTATGATTTGACAAAAGAGTACAATATAATAGATGCACAAGCTGAAACTGTACATCGAACAATATCTATGAT GGGAAAAAAAGATTTATTAG
Downstream 100 bases:
>100_bases TTGGCTGAATCTACAGTTGATTCGGTTTATAGTGGAACAAATCAATTTGCGATAGAATTTTTATAGTGTAATTAGCACTC TTATAAAAAGAGTGCTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTIKKKKLFKKRIVILFVLVACLLIFTLIVNPKNQEDKKLTSASKTFVQTDRKGKYDYVLMKTGDVNQMTIGAYQGCEIV SFYNALVYLDKTQGRTVTDWIESLPYVGWGGDPGSGYAGNPWTSDEDIPDGGFPTIWPTALMSFAQENNIQVADLSGKSI SEIKDAVLSEHLVEMWVTIDFDEPNITYDDYYGYKVVANTHAVILDGYNEKKNEFHVTDPIKGKY
Sequences:
>Translated_225_residues MTIKKKKLFKKRIVILFVLVACLLIFTLIVNPKNQEDKKLTSASKTFVQTDRKGKYDYVLMKTGDVNQMTIGAYQGCEIV SFYNALVYLDKTQGRTVTDWIESLPYVGWGGDPGSGYAGNPWTSDEDIPDGGFPTIWPTALMSFAQENNIQVADLSGKSI SEIKDAVLSEHLVEMWVTIDFDEPNITYDDYYGYKVVANTHAVILDGYNEKKNEFHVTDPIKGKY >Mature_224_residues TIKKKKLFKKRIVILFVLVACLLIFTLIVNPKNQEDKKLTSASKTFVQTDRKGKYDYVLMKTGDVNQMTIGAYQGCEIVS FYNALVYLDKTQGRTVTDWIESLPYVGWGGDPGSGYAGNPWTSDEDIPDGGFPTIWPTALMSFAQENNIQVADLSGKSIS EIKDAVLSEHLVEMWVTIDFDEPNITYDDYYGYKVVANTHAVILDGYNEKKNEFHVTDPIKGKY
Specific function: Unknown
COG id: COG4990
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25393; Mature: 25262
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKKKKLFKKRIVILFVLVACLLIFTLIVNPKNQEDKKLTSASKTFVQTDRKGKYDYVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE MKTGDVNQMTIGAYQGCEIVSFYNALVYLDKTQGRTVTDWIESLPYVGWGGDPGSGYAGN EECCCCCEEEECCCCCCHHHHHHCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PWTSDEDIPDGGFPTIWPTALMSFAQENNIQVADLSGKSISEIKDAVLSEHLVEMWVTID CCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEE FDEPNITYDDYYGYKVVANTHAVILDGYNEKKNEFHVTDPIKGKY CCCCCCEECCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCCC >Mature Secondary Structure TIKKKKLFKKRIVILFVLVACLLIFTLIVNPKNQEDKKLTSASKTFVQTDRKGKYDYVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE MKTGDVNQMTIGAYQGCEIVSFYNALVYLDKTQGRTVTDWIESLPYVGWGGDPGSGYAGN EECCCCCEEEECCCCCCHHHHHHCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PWTSDEDIPDGGFPTIWPTALMSFAQENNIQVADLSGKSISEIKDAVLSEHLVEMWVTID CCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEE FDEPNITYDDYYGYKVVANTHAVILDGYNEKKNEFHVTDPIKGKY CCCCCCEECCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA