| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ywiI
Identifier: 15674187
GI number: 15674187
Start: 2287402
End: 2288286
Strand: Reverse
Name: ywiI
Synonym: L70850
Alternate gene names: NA
Gene position: 2288286-2287402 (Counterclockwise)
Preceding gene: 15674188
Following gene: 15674186
Centisome position: 96.73
GC content: 32.2
Gene sequence:
>885_bases ATGGTTAATCAATACTATGGTTTAAAACTTCAAGAACTCTGTGAAGCTAAAGAAATCACGAAAAATGAAATTATCAAAAA AACAGGAATTCCTAAAAGTAGTCTCTCTCGTTTTTTTAGTGGAGAAGGTTATTTAAATCTTGAACAAATTGATGCTTTGC TTGAATTTCTTCACTTGGAACTTTCTGAATATGATTATTATCTCAATAATTTTAAACATAGTTTTTACGAAGAATTATTT AGTATAATCGACCAAGCGGCAACGAATAATAATATTGAAGAACTAAAAGACATTGCCTGGCAATGTGAGCAAATTGGCGA ACATTTGATTGCTCTTTGTGCCAAAGCACGCTTAGAAAAGTTGCCAGAAAACGAAGTGGTTGAGTTAAGTTCTTTTATTT TAGGAATTGAAATATTTAGTTTTTATGAACTTCTCATTTTGTCAGATACCATTGAGCAATTTTCGTCAGAAATGATAAAA GCAATTATTCAAGATTTGAGCCATCATCATCAAAGGTTAGCCAATCGTACACGTTATCGCAAAATTATTTGTCAAATCGC CTGTCGCGGAGCAGTGACTTGTATCCAAGAAGGGAAAGAAAAGGAAGCGCAAGAATGTCTGGCTCTGGTCAAAGCATATT GTCATGAAAAAGACGCATATTCTAGATTGATTTATCGCTTTACTAAAGGTTATTATTGTATTTTTTATGGTCAAGGCGAA GAACGACTTCTGGGAATTGAAAGCATGAAAAAGGTCATCGAAATTTTTGATTGGGAAGGAAGTATAAATTTAGCAAAAAC CTACCAAAAACTCTATGATAAATATGTGAAAAACTATAATTTTCCTCAATGGTTAAGTGATATTCTAGGAAAAGATTCAA TTTGA
Upstream 100 bases:
>100_bases TTGACGGGCTTTTTTATATTACATAAATTCCTGTCGTTGTAACAATAATGAAAAAAGTATATAATATGACCATAAAGTTA CGACTGGAGAGACAAGACAA
Downstream 100 bases:
>100_bases ATCTTTTTTTTGTGCTTTCGAAATCGGTGCTACAATAAAGTTAAGGAGACAAAAATAAAAACAAACGAGGAAAAACCAAT GGACAAATTCGCAAGCTACT
Product: transcription regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Rgg Family Transcriptional Regulator; XRE Family Transcriptional Regulator
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MVNQYYGLKLQELCEAKEITKNEIIKKTGIPKSSLSRFFSGEGYLNLEQIDALLEFLHLELSEYDYYLNNFKHSFYEELF SIIDQAATNNNIEELKDIAWQCEQIGEHLIALCAKARLEKLPENEVVELSSFILGIEIFSFYELLILSDTIEQFSSEMIK AIIQDLSHHHQRLANRTRYRKIICQIACRGAVTCIQEGKEKEAQECLALVKAYCHEKDAYSRLIYRFTKGYYCIFYGQGE ERLLGIESMKKVIEIFDWEGSINLAKTYQKLYDKYVKNYNFPQWLSDILGKDSI
Sequences:
>Translated_294_residues MVNQYYGLKLQELCEAKEITKNEIIKKTGIPKSSLSRFFSGEGYLNLEQIDALLEFLHLELSEYDYYLNNFKHSFYEELF SIIDQAATNNNIEELKDIAWQCEQIGEHLIALCAKARLEKLPENEVVELSSFILGIEIFSFYELLILSDTIEQFSSEMIK AIIQDLSHHHQRLANRTRYRKIICQIACRGAVTCIQEGKEKEAQECLALVKAYCHEKDAYSRLIYRFTKGYYCIFYGQGE ERLLGIESMKKVIEIFDWEGSINLAKTYQKLYDKYVKNYNFPQWLSDILGKDSI >Mature_294_residues MVNQYYGLKLQELCEAKEITKNEIIKKTGIPKSSLSRFFSGEGYLNLEQIDALLEFLHLELSEYDYYLNNFKHSFYEELF SIIDQAATNNNIEELKDIAWQCEQIGEHLIALCAKARLEKLPENEVVELSSFILGIEIFSFYELLILSDTIEQFSSEMIK AIIQDLSHHHQRLANRTRYRKIICQIACRGAVTCIQEGKEKEAQECLALVKAYCHEKDAYSRLIYRFTKGYYCIFYGQGE ERLLGIESMKKVIEIFDWEGSINLAKTYQKLYDKYVKNYNFPQWLSDILGKDSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34401; Mature: 34401
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNQYYGLKLQELCEAKEITKNEIIKKTGIPKSSLSRFFSGEGYLNLEQIDALLEFLHLE CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LSEYDYYLNNFKHSFYEELFSIIDQAATNNNIEELKDIAWQCEQIGEHLIALCAKARLEK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPENEVVELSSFILGIEIFSFYELLILSDTIEQFSSEMIKAIIQDLSHHHQRLANRTRYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIICQIACRGAVTCIQEGKEKEAQECLALVKAYCHEKDAYSRLIYRFTKGYYCIFYGQGE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCC ERLLGIESMKKVIEIFDWEGSINLAKTYQKLYDKYVKNYNFPQWLSDILGKDSI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure MVNQYYGLKLQELCEAKEITKNEIIKKTGIPKSSLSRFFSGEGYLNLEQIDALLEFLHLE CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LSEYDYYLNNFKHSFYEELFSIIDQAATNNNIEELKDIAWQCEQIGEHLIALCAKARLEK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPENEVVELSSFILGIEIFSFYELLILSDTIEQFSSEMIKAIIQDLSHHHQRLANRTRYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIICQIACRGAVTCIQEGKEKEAQECLALVKAYCHEKDAYSRLIYRFTKGYYCIFYGQGE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCC ERLLGIESMKKVIEIFDWEGSINLAKTYQKLYDKYVKNYNFPQWLSDILGKDSI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA