| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ywiG
Identifier: 15674185
GI number: 15674185
Start: 2285027
End: 2285644
Strand: Reverse
Name: ywiG
Synonym: L68475
Alternate gene names: 15674185
Gene position: 2285644-2285027 (Counterclockwise)
Preceding gene: 15674186
Following gene: 15674184
Centisome position: 96.62
GC content: 32.36
Gene sequence:
>618_bases ATGATATTAAAAATAAAAAATTTAAAGATACCAGACATTGCTCCGCTTAATTTTGAGATTTCTGAAAATGGTTTGTACGG TCTGATTGGACGAAATGGGATTGGGAAAAGTACACTTTTCGGCATTCTTTCAGGAGAAATTGGATTTTCTCAAGGAGAAA TAGAAAATGGGCATGTCGCTTATCTTCCCGATGTAGAATCTTTTGAAGAAAGTTTAAAAATGCATGATTATTTTAAAATT TTGAAAAATAGTGAACAGGATAGAGCAAGAGAGTTAAGTCTTACTTTTGGTGCAGATAAATTTGTGAAAAAGAGAATTGA CCAATTTTCTTTAGGAATGAAAGAGCTTTTTGCGACAATTTTATCATTTTCTATCGACTGTGATATTTTAATCATTGACG AGCTATTCAGTGGGCTTGACGTTTCCAAAAAAGCCCTAGTTTATGAAGAAGTGAAAAAAATCGCTCAAGAAAAAATTGTT TTATTAACCTCACACAATCTCAAGGAAATTGAACATTTCTGTGACCAAGCTTATCTATTGTCCGAAAAAGGACTGACTTT GGTGACAAATTTTGATGAAGCGGCAAAAGAAATCGGTTATATGGATGTATTTTTTTAG
Upstream 100 bases:
>100_bases ATTCTATATTAATCGGGGCTGGCTATCTACTTTCTTTAAGTGTATTATTTTTGCTCATTTCTGTCTTCATTATTAAAAAT CAAAAAACAAGGAGAATCTC
Downstream 100 bases:
>100_bases TTAAAGGGAATTAATGAGAAAGAATACTACATTATTTGGTTTATATATTTTCTAATAATTGTTTCCGATTAAGAGATAAG TCGAATGAAAGATAAGGAGA
Product: ABC transporter ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MILKIKNLKIPDIAPLNFEISENGLYGLIGRNGIGKSTLFGILSGEIGFSQGEIENGHVAYLPDVESFEESLKMHDYFKI LKNSEQDRARELSLTFGADKFVKKRIDQFSLGMKELFATILSFSIDCDILIIDELFSGLDVSKKALVYEEVKKIAQEKIV LLTSHNLKEIEHFCDQAYLLSEKGLTLVTNFDEAAKEIGYMDVFF
Sequences:
>Translated_205_residues MILKIKNLKIPDIAPLNFEISENGLYGLIGRNGIGKSTLFGILSGEIGFSQGEIENGHVAYLPDVESFEESLKMHDYFKI LKNSEQDRARELSLTFGADKFVKKRIDQFSLGMKELFATILSFSIDCDILIIDELFSGLDVSKKALVYEEVKKIAQEKIV LLTSHNLKEIEHFCDQAYLLSEKGLTLVTNFDEAAKEIGYMDVFF >Mature_205_residues MILKIKNLKIPDIAPLNFEISENGLYGLIGRNGIGKSTLFGILSGEIGFSQGEIENGHVAYLPDVESFEESLKMHDYFKI LKNSEQDRARELSLTFGADKFVKKRIDQFSLGMKELFATILSFSIDCDILIIDELFSGLDVSKKALVYEEVKKIAQEKIV LLTSHNLKEIEHFCDQAYLLSEKGLTLVTNFDEAAKEIGYMDVFF
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27436953, Length=200, Percent_Identity=23.5, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=186, Percent_Identity=23.6559139784946, Blast_Score=61, Evalue=6e-11, Organism=Drosophila melanogaster, GI24666092, Length=186, Percent_Identity=27.4193548387097, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007184, Length=174, Percent_Identity=24.7126436781609, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI221500365, Length=174, Percent_Identity=24.7126436781609, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 23158; Mature: 23158
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00618 RECF_2 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKIKNLKIPDIAPLNFEISENGLYGLIGRNGIGKSTLFGILSGEIGFSQGEIENGHVA CEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEE YLPDVESFEESLKMHDYFKILKNSEQDRARELSLTFGADKFVKKRIDQFSLGMKELFATI ECCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECHHHHHHHHHHHHCCCHHHHHHHH LSFSIDCDILIIDELFSGLDVSKKALVYEEVKKIAQEKIVLLTSHNLKEIEHFCDQAYLL HHHCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEE SEKGLTLVTNFDEAAKEIGYMDVFF CCCCEEEEECCHHHHHHCCCCCCCC >Mature Secondary Structure MILKIKNLKIPDIAPLNFEISENGLYGLIGRNGIGKSTLFGILSGEIGFSQGEIENGHVA CEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEE YLPDVESFEESLKMHDYFKILKNSEQDRARELSLTFGADKFVKKRIDQFSLGMKELFATI ECCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECHHHHHHHHHHHHCCCHHHHHHHH LSFSIDCDILIIDELFSGLDVSKKALVYEEVKKIAQEKIVLLTSHNLKEIEHFCDQAYLL HHHCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEE SEKGLTLVTNFDEAAKEIGYMDVFF CCCCEEEEECCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]