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The map label for this gene is tra983O

Identifier: 15674165

GI number: 15674165

Start: 2267576

End: 2268523

Strand: Reverse

Name: tra983O

Synonym: L00457

Alternate gene names: 15674165

Gene position: 2268523-2267576 (Counterclockwise)

Preceding gene: 15674166

Following gene: 15674163

Centisome position: 95.9

GC content: 44.73

Gene sequence:

>948_bases
ATGCAAGACTATTCTATCACAAGCCAGAGCAAAGGGAAACACCTGACCAATCAAGACCGTTTAAACATTGAACGTTGGCA
CAATAAAGAAGGACTGAGCAACCGTGAGATTGCGCGCTTATTGAATAAAGCTCATGGGACGATTGACAGAGAGATGAAGC
GAGGGGAAATCCAGCTCAAGCGGAAGGTAAAATACTCTGCTAAAAAGGCTCAAGAAAATTATGAAGGATTGAGGGCTCAC
AGTGTTCGTCCGAGTAAACTCACGACTGAGATTGATTGTTATGTGAGTACACGTCTTAAAGAAGACAAGGACTCTTTGGA
AGTCATTCATCAGGCTCTAAAAGGAGTTTCTCTGAGCAGCCTCTACAATTGGGTCAACTGGGGCTGGTTAGAAGCCAAGC
GTCATCATCTTTTCTATCCGCAGTATAAGGCGGCAAAGAAAATCAAACCTCGTGCGCCAAAGCATCCTTTTGGCAAGTCT
ATTGAAGAACGGCCTGAGTTCATTAACAATCGCTTAGAAGTGGGGCATTACGAGATTGACACGGTCATTCTTACGAGAGC
TAAGAACAAGGTGCTTTTGACGCTCACAGAGCGAAAATACCGCACGGAGATCATTCGCTTGATTGATGGGAAAACAGCAC
AGGCGGTCAATGATGAGCTGGTGGAACTTCAAAAAAGTTATGACTTCAAATCCATTACCCCTGACAATGGCCATGAATTT
GCAAGGTTCTCTGAGGTCGTAAGCTGTCCAGTTTACTATGCACACGCCTACGCGAGCTTTGAGCGAGGGACGAATGAAAA
CCATAACCGAATGATTCGTAGGCATCTGCCAAAAGGCACAACAAAGACGACCCCTGAAGAAGTCGCCGCTATCGAGTATT
GGATGAACCATTATCCAAGAAAAATGTTCAACTATAAGAGTTCATATGAGATGAGCTTGGCTGGCTAA

Upstream 100 bases:

>100_bases
CGCAAATTGTAAAATGAAGTTAGCCACCTTGAGTCAAGCAAAAAACATCTGAATCTCTTATACTAGAAGTTCGACCAAAT
AGTATAAAAAGGAAATTCAG

Downstream 100 bases:

>100_bases
CTTGGACTTGCAATTTGCGTTGAAGAAGAAAAATAAACTTGTATTCTTTAAAGACTCAATACTTCCATATATCACAAAAA
AGTATTGAGTTAATTTTTAA

Product: transposase of IS983O

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKAHGTIDREMKRGEIQLKRKVKYSAKKAQENYEGLRAH
SVRPSKLTTEIDCYVSTRLKEDKDSLEVIHQALKGVSLSSLYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKS
IEERPEFINNRLEVGHYEIDTVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVNDELVELQKSYDFKSITPDNGHEF
ARFSEVVSCPVYYAHAYASFERGTNENHNRMIRRHLPKGTTKTTPEEVAAIEYWMNHYPRKMFNYKSSYEMSLAG

Sequences:

>Translated_315_residues
MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKAHGTIDREMKRGEIQLKRKVKYSAKKAQENYEGLRAH
SVRPSKLTTEIDCYVSTRLKEDKDSLEVIHQALKGVSLSSLYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKS
IEERPEFINNRLEVGHYEIDTVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVNDELVELQKSYDFKSITPDNGHEF
ARFSEVVSCPVYYAHAYASFERGTNENHNRMIRRHLPKGTTKTTPEEVAAIEYWMNHYPRKMFNYKSSYEMSLAG
>Mature_315_residues
MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKAHGTIDREMKRGEIQLKRKVKYSAKKAQENYEGLRAH
SVRPSKLTTEIDCYVSTRLKEDKDSLEVIHQALKGVSLSSLYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKS
IEERPEFINNRLEVGHYEIDTVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVNDELVELQKSYDFKSITPDNGHEF
ARFSEVVSCPVYYAHAYASFERGTNENHNRMIRRHLPKGTTKTTPEEVAAIEYWMNHYPRKMFNYKSSYEMSLAG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=163, Percent_Identity=36.1963190184049, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787671, Length=163, Percent_Identity=36.1963190184049, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786450, Length=163, Percent_Identity=36.1963190184049, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36914; Mature: 36914

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKAHGTIDREMKRGEIQLK
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHH
RKVKYSAKKAQENYEGLRAHSVRPSKLTTEIDCYVSTRLKEDKDSLEVIHQALKGVSLSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEHHHCCCCHHHHHHHHHHHHCCCHHH
LYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKSIEERPEFINNRLEVGHYEID
HHHHHHCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCEEEE
TVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVNDELVELQKSYDFKSITPDNGHEF
EEEEEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ARFSEVVSCPVYYAHAYASFERGTNENHNRMIRRHLPKGTTKTTPEEVAAIEYWMNHYPR
HHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KMFNYKSSYEMSLAG
HHHCCCCCCEEEECC
>Mature Secondary Structure
MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKAHGTIDREMKRGEIQLK
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHH
RKVKYSAKKAQENYEGLRAHSVRPSKLTTEIDCYVSTRLKEDKDSLEVIHQALKGVSLSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEHHHCCCCHHHHHHHHHHHHCCCHHH
LYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKSIEERPEFINNRLEVGHYEID
HHHHHHCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCEEEE
TVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVNDELVELQKSYDFKSITPDNGHEF
EEEEEECCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ARFSEVVSCPVYYAHAYASFERGTNENHNRMIRRHLPKGTTKTTPEEVAAIEYWMNHYPR
HHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KMFNYKSSYEMSLAG
HHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8393068 [H]