| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yvjA
Identifier: 15674107
GI number: 15674107
Start: 2194240
End: 2194776
Strand: Reverse
Name: yvjA
Synonym: L177685
Alternate gene names: NA
Gene position: 2194776-2194240 (Counterclockwise)
Preceding gene: 15674108
Following gene: 15674106
Centisome position: 92.78
GC content: 30.73
Gene sequence:
>537_bases GTGGAAACGACTAATAAAGAGATAGTTTATTGTCAAAAAGTGCTTCACTTGCTTGAGGATTTGCAGAAAGTTCAACAAAG CATTGAATCCTTTGCTGAACACTCTGATAAGCAAAAAATTCATACTCATCAAAGTCTATCATTGATTTTAAAATTAGCAG TTCTTCTTATTATTTTAGGAGTAGGAATATTTTTAAAGTTGTCATTAGTTCTTTTGTTGGTGATTTCAGTTGTCTATTTA TTCATTTTTTGTCTTTTGTTCAGATATGGTTCCAAAAAATTTAAAGAAAAATTAGCTTTAGAGGGTGAAAGTTCTCTAAA AATGAAATCTTTAAATGCTGATTTGAACAAACTTAAAGAAGATGAAGAAAAAATTCAGACAGAATTAAATCATTTTCGAC GAATTCCCACACAATTTAAAACAATAGAAGCTGTCAGTCATATGATTCGCTATATGAAACGTGGCGAAGCACAGACAGTA GAAGAAGCACTCTATTTTTGGGAAATGGATGAAGAAAATCGCTCAACTGGTAAATAG
Upstream 100 bases:
>100_bases TTGAGTTCACAGACTTTTATTTTGAACATGGCTACAAAGACCCTCGGGGTCTCAATCGCATATTAGCTCGACTAGTAAGG GAGAATGAAAGGTAGATTGT
Downstream 100 bases:
>100_bases TTTTACTGACAGCTCTGTCAGTAACTATTAATTTTAAAATAAAATAACTGACAGTTTTGTCAGTTATTTTATTCTTAAAA AAGTATGAAAAGCAACATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues METTNKEIVYCQKVLHLLEDLQKVQQSIESFAEHSDKQKIHTHQSLSLILKLAVLLIILGVGIFLKLSLVLLLVISVVYL FIFCLLFRYGSKKFKEKLALEGESSLKMKSLNADLNKLKEDEEKIQTELNHFRRIPTQFKTIEAVSHMIRYMKRGEAQTV EEALYFWEMDEENRSTGK
Sequences:
>Translated_178_residues METTNKEIVYCQKVLHLLEDLQKVQQSIESFAEHSDKQKIHTHQSLSLILKLAVLLIILGVGIFLKLSLVLLLVISVVYL FIFCLLFRYGSKKFKEKLALEGESSLKMKSLNADLNKLKEDEEKIQTELNHFRRIPTQFKTIEAVSHMIRYMKRGEAQTV EEALYFWEMDEENRSTGK >Mature_178_residues METTNKEIVYCQKVLHLLEDLQKVQQSIESFAEHSDKQKIHTHQSLSLILKLAVLLIILGVGIFLKLSLVLLLVISVVYL FIFCLLFRYGSKKFKEKLALEGESSLKMKSLNADLNKLKEDEEKIQTELNHFRRIPTQFKTIEAVSHMIRYMKRGEAQTV EEALYFWEMDEENRSTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20763; Mature: 20763
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTNKEIVYCQKVLHLLEDLQKVQQSIESFAEHSDKQKIHTHQSLSLILKLAVLLIILG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIFLKLSLVLLLVISVVYLFIFCLLFRYGSKKFKEKLALEGESSLKMKSLNADLNKLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DEEKIQTELNHFRRIPTQFKTIEAVSHMIRYMKRGEAQTVEEALYFWEMDEENRSTGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure METTNKEIVYCQKVLHLLEDLQKVQQSIESFAEHSDKQKIHTHQSLSLILKLAVLLIILG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIFLKLSLVLLLVISVVYLFIFCLLFRYGSKKFKEKLALEGESSLKMKSLNADLNKLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DEEKIQTELNHFRRIPTQFKTIEAVSHMIRYMKRGEAQTVEEALYFWEMDEENRSTGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA