| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yvhB
Identifier: 15674089
GI number: 15674089
Start: 2175122
End: 2176939
Strand: Reverse
Name: yvhB
Synonym: L158566
Alternate gene names: 15674089
Gene position: 2176939-2175122 (Counterclockwise)
Preceding gene: 15674090
Following gene: 15674088
Centisome position: 92.03
GC content: 38.17
Gene sequence:
>1818_bases ATGAAGCGTTACGTCACAGGTTTTAATGGATTACGGACGATTGGTGTTTTAACAGTTATTCTATATCACCTCTGGCCAAA CCATGTTCAGGGTGGTTTTCTTGGTGTTGTTTTATTCTTTGTTCTCTCGGGCTATTTGGTGACGGATTCGCTCCTTCGCG AGTATGAAAAAAATAAGAAGATTAATATTTGGAAGTTTTGGGGAAGAAGATTAAAGCGTCTATATCCATTACTAGTTGCA ATTTTTCTTCTTGTGACACCTTATATCATCATTTTTCAACCTAATTTGTGGGCGGGATTACGTTCTAATTTCCTTTCTGC TGTATTTTCGGTTCAAAACTGGTGGCAAATTTCGCAAGGAAGTTCATATTTTGCTGATATTGCGGGTGCTTCACCTTTCA AACATATTTATTATTTATCAATCGAGGGGCAATTCTTCATCCTTTGGCCTTTGCTGTTGATTGTTTTGCTAAAATTTGTT AAAAAAAGAGGTCGGATTTTTGTCATTGCTAATGTTTTGGCCTTGATTTCGGCAATTTGGATGGCAATTCTTTTCGTTCC CGGAGCAGACCCAACGCGGGTTTATTATGGAACGGATACGCGTTTCTTTAGCTTGATGATGGGGGCTAGTCTTGCTTTCA TTTGGCCTTTGAATAAACTTTCACATAAGGTTAATAAACGAGCGGTTAAAATTGCTTGGCAGTTGACTATTGGATTATCT TTGCTTTTGCTGCTTGCTTATATCTTTATGCCTGCTCAAGGGACATTTACTTATTATGGCGGAATGTGGCTAGCAAGTTT GGCCAGTGTGATAATGGTTGCTTTGGTGGCACATCCAAGTCTTCCGACTAACAAGCTATTTTCAAACCCTGTTTTTGAAT ATATTGGCTCACGTTCTTACGGAATTTACTTGTGGCAACTTCCTGTTTTTGCTTTCGCTGAAGCTAAGGTACTTGCTCCT ACCGCTTGGTATAATTTAATTTGGCAATTGGCGCTCATTCTTATTCTGACGGAACTTTCATATCGTTTGATTGAGCTACC AACGCAGCGCTTTGATTATAGTAATATTTTAGGAATCCTTCAAAATTTTGTTCGAGAAAAAGGTTGGAAACTTAAAAAGA ATATTTTACCGATGCTCATTTCAGGGCTTGCTCTAATAAGCTTAGGTTTCATTATTTTTTCACCGCCTTCACCCCATGAC CAACGAGTGATTGAAGAAAAAATAATGGCCCAACAGATTGCACTACAAAAGAAACAACTGGCTGAGGCTAACAACAAAGT ACCGATGTCCTTAAAGGCGGTAGCAGAAAAGTATAAGGTTCAACCTGTAGTTGCTGAAAAAGCTTCTCAAATGAATGTTC TAGCCCTTGGAGATTCGGTTATGGTTGCTGCTTCTACAAATCTTCAAGAAGTTTTTCCACATATGTATATTGATGCAGCA GTTGGAAGACAAGCAGAGTCACTGGCGACAGACTTAACGAATGCTAAATCAAAAATGCCTAATCCTGATGCTTACTTAAT TGGTCTAGGAACAAATGGAACAATTAAAGAAGATGAAATTGATGCTGCGATGAAAGTGGCAGGTAACAAACCTGTTTATT GGATGAATGTCCACGCAGACCGTGTTTGGGCAAAACCTAATAATAATTTGCTGACGAAAATGGCAAAGAAATATAAAAAT TTGAAAATTATTGATTGGAATAAAAAAGCATCTGGTCAAAGTTCATGGTTCTACAGTGATAATATTCATCCTAAAGGAAC AGGGGCCGAAAAATACGCCGCTTTAGTAGCTAATAGTCTGACCAATGTGGAAAAATAG
Upstream 100 bases:
>100_bases ACTGAAAAAAGAGGTAGAAATATGGTAGAATTAGAGGTAAAGCGTAGTAGTTTTAAGACAAGAAAATTTTAAAGAATAAA GATAGAAATCGAGAAGAAAA
Downstream 100 bases:
>100_bases TTTGCGCTTCTAAATAATTTTTGATAGAATAAGAGATAATATGTTAAGAAAAGCTGGATTAGCGTGCACCATATGTGGTT CACGAAATTATACCCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKRYVTGFNGLRTIGVLTVILYHLWPNHVQGGFLGVVLFFVLSGYLVTDSLLREYEKNKKINIWKFWGRRLKRLYPLLVA IFLLVTPYIIIFQPNLWAGLRSNFLSAVFSVQNWWQISQGSSYFADIAGASPFKHIYYLSIEGQFFILWPLLLIVLLKFV KKRGRIFVIANVLALISAIWMAILFVPGADPTRVYYGTDTRFFSLMMGASLAFIWPLNKLSHKVNKRAVKIAWQLTIGLS LLLLLAYIFMPAQGTFTYYGGMWLASLASVIMVALVAHPSLPTNKLFSNPVFEYIGSRSYGIYLWQLPVFAFAEAKVLAP TAWYNLIWQLALILILTELSYRLIELPTQRFDYSNILGILQNFVREKGWKLKKNILPMLISGLALISLGFIIFSPPSPHD QRVIEEKIMAQQIALQKKQLAEANNKVPMSLKAVAEKYKVQPVVAEKASQMNVLALGDSVMVAASTNLQEVFPHMYIDAA VGRQAESLATDLTNAKSKMPNPDAYLIGLGTNGTIKEDEIDAAMKVAGNKPVYWMNVHADRVWAKPNNNLLTKMAKKYKN LKIIDWNKKASGQSSWFYSDNIHPKGTGAEKYAALVANSLTNVEK
Sequences:
>Translated_605_residues MKRYVTGFNGLRTIGVLTVILYHLWPNHVQGGFLGVVLFFVLSGYLVTDSLLREYEKNKKINIWKFWGRRLKRLYPLLVA IFLLVTPYIIIFQPNLWAGLRSNFLSAVFSVQNWWQISQGSSYFADIAGASPFKHIYYLSIEGQFFILWPLLLIVLLKFV KKRGRIFVIANVLALISAIWMAILFVPGADPTRVYYGTDTRFFSLMMGASLAFIWPLNKLSHKVNKRAVKIAWQLTIGLS LLLLLAYIFMPAQGTFTYYGGMWLASLASVIMVALVAHPSLPTNKLFSNPVFEYIGSRSYGIYLWQLPVFAFAEAKVLAP TAWYNLIWQLALILILTELSYRLIELPTQRFDYSNILGILQNFVREKGWKLKKNILPMLISGLALISLGFIIFSPPSPHD QRVIEEKIMAQQIALQKKQLAEANNKVPMSLKAVAEKYKVQPVVAEKASQMNVLALGDSVMVAASTNLQEVFPHMYIDAA VGRQAESLATDLTNAKSKMPNPDAYLIGLGTNGTIKEDEIDAAMKVAGNKPVYWMNVHADRVWAKPNNNLLTKMAKKYKN LKIIDWNKKASGQSSWFYSDNIHPKGTGAEKYAALVANSLTNVEK >Mature_605_residues MKRYVTGFNGLRTIGVLTVILYHLWPNHVQGGFLGVVLFFVLSGYLVTDSLLREYEKNKKINIWKFWGRRLKRLYPLLVA IFLLVTPYIIIFQPNLWAGLRSNFLSAVFSVQNWWQISQGSSYFADIAGASPFKHIYYLSIEGQFFILWPLLLIVLLKFV KKRGRIFVIANVLALISAIWMAILFVPGADPTRVYYGTDTRFFSLMMGASLAFIWPLNKLSHKVNKRAVKIAWQLTIGLS LLLLLAYIFMPAQGTFTYYGGMWLASLASVIMVALVAHPSLPTNKLFSNPVFEYIGSRSYGIYLWQLPVFAFAEAKVLAP TAWYNLIWQLALILILTELSYRLIELPTQRFDYSNILGILQNFVREKGWKLKKNILPMLISGLALISLGFIIFSPPSPHD QRVIEEKIMAQQIALQKKQLAEANNKVPMSLKAVAEKYKVQPVVAEKASQMNVLALGDSVMVAASTNLQEVFPHMYIDAA VGRQAESLATDLTNAKSKMPNPDAYLIGLGTNGTIKEDEIDAAMKVAGNKPVYWMNVHADRVWAKPNNNLLTKMAKKYKN LKIIDWNKKASGQSSWFYSDNIHPKGTGAEKYAALVANSLTNVEK
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17562856, Length=323, Percent_Identity=25.077399380805, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71990417, Length=372, Percent_Identity=24.1935483870968, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17507733, Length=331, Percent_Identity=27.4924471299094, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17559158, Length=341, Percent_Identity=27.8592375366569, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI86562056, Length=330, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17541412, Length=343, Percent_Identity=25.0728862973761, Blast_Score=79, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17541414, Length=332, Percent_Identity=25.3012048192771, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193208811, Length=327, Percent_Identity=24.4648318042813, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17560876, Length=367, Percent_Identity=25.8855585831063, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17543924, Length=152, Percent_Identity=32.8947368421053, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507167, Length=328, Percent_Identity=24.6951219512195, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562866, Length=161, Percent_Identity=31.055900621118, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507735, Length=331, Percent_Identity=26.5861027190332, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17541014, Length=384, Percent_Identity=24.7395833333333, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17541016, Length=384, Percent_Identity=24.7395833333333, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71984481, Length=232, Percent_Identity=26.7241379310345, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI212640769, Length=325, Percent_Identity=24.9230769230769, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17507287, Length=316, Percent_Identity=25.3164556962025, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193203181, Length=351, Percent_Identity=24.2165242165242, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646204, Length=347, Percent_Identity=26.5129682997118, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507283, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17539118, Length=149, Percent_Identity=32.8859060402685, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203179, Length=314, Percent_Identity=25.1592356687898, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32567150, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71982248, Length=332, Percent_Identity=25.6024096385542, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17559544, Length=316, Percent_Identity=24.0506329113924, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17542538, Length=343, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532481, Length=366, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI133903927, Length=158, Percent_Identity=29.746835443038, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17562864, Length=151, Percent_Identity=31.7880794701987, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 68311; Mature: 68311
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYVTGFNGLRTIGVLTVILYHLWPNHVQGGFLGVVLFFVLSGYLVTDSLLREYEKNKK CCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INIWKFWGRRLKRLYPLLVAIFLLVTPYIIIFQPNLWAGLRSNFLSAVFSVQNWWQISQG EEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCC SSYFADIAGASPFKHIYYLSIEGQFFILWPLLLIVLLKFVKKRGRIFVIANVLALISAIW CCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH MAILFVPGADPTRVYYGTDTRFFSLMMGASLAFIWPLNKLSHKVNKRAVKIAWQLTIGLS HHHHCCCCCCCCEEEECCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHEEEEHHHHHHHH LLLLLAYIFMPAQGTFTYYGGMWLASLASVIMVALVAHPSLPTNKLFSNPVFEYIGSRSY HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCC GIYLWQLPVFAFAEAKVLAPTAWYNLIWQLALILILTELSYRLIELPTQRFDYSNILGIL EEEEEECHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH QNFVREKGWKLKKNILPMLISGLALISLGFIIFSPPSPHDQRVIEEKIMAQQIALQKKQL HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AEANNKVPMSLKAVAEKYKVQPVVAEKASQMNVLALGDSVMVAASTNLQEVFPHMYIDAA HHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHHHH VGRQAESLATDLTNAKSKMPNPDAYLIGLGTNGTIKEDEIDAAMKVAGNKPVYWMNVHAD HCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECC RVWAKPNNNLLTKMAKKYKNLKIIDWNKKASGQSSWFYSDNIHPKGTGAEKYAALVANSL EEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH TNVEK HCCCC >Mature Secondary Structure MKRYVTGFNGLRTIGVLTVILYHLWPNHVQGGFLGVVLFFVLSGYLVTDSLLREYEKNKK CCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INIWKFWGRRLKRLYPLLVAIFLLVTPYIIIFQPNLWAGLRSNFLSAVFSVQNWWQISQG EEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCC SSYFADIAGASPFKHIYYLSIEGQFFILWPLLLIVLLKFVKKRGRIFVIANVLALISAIW CCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH MAILFVPGADPTRVYYGTDTRFFSLMMGASLAFIWPLNKLSHKVNKRAVKIAWQLTIGLS HHHHCCCCCCCCEEEECCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHEEEEHHHHHHHH LLLLLAYIFMPAQGTFTYYGGMWLASLASVIMVALVAHPSLPTNKLFSNPVFEYIGSRSY HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCC GIYLWQLPVFAFAEAKVLAPTAWYNLIWQLALILILTELSYRLIELPTQRFDYSNILGIL EEEEEECHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH QNFVREKGWKLKKNILPMLISGLALISLGFIIFSPPSPHDQRVIEEKIMAQQIALQKKQL HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AEANNKVPMSLKAVAEKYKVQPVVAEKASQMNVLALGDSVMVAASTNLQEVFPHMYIDAA HHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHHHH VGRQAESLATDLTNAKSKMPNPDAYLIGLGTNGTIKEDEIDAAMKVAGNKPVYWMNVHAD HCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECC RVWAKPNNNLLTKMAKKYKNLKIIDWNKKASGQSSWFYSDNIHPKGTGAEKYAALVANSL EEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH TNVEK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]