| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yuiC
Identifier: 15673989
GI number: 15673989
Start: 2084969
End: 2085826
Strand: Reverse
Name: yuiC
Synonym: L68401
Alternate gene names: 15673989
Gene position: 2085826-2084969 (Counterclockwise)
Preceding gene: 15673990
Following gene: 15673988
Centisome position: 88.17
GC content: 37.53
Gene sequence:
>858_bases ATGAGTATTATTGGACAAACAATCTCCGCGATAATCGTGGAAGAAAGTGAACGTTTCTATTTTCTCCAAAAGGGAGAAGA TTTATTACGTTTAGATAAAACAGAAGGTGAACATACAGTTGGCGATGTGGTAACTGGTTTTGTTTATGTGGATAAAGATG ACCATCGTCGTTTGACGACTTTGGAACAAAAAGCAACAAATGAGCATTATGGTTGGGGAACGGTAACAGCTGTACGTAAG GACCTTGGTGCCTTTGTTGACACAGGTTTACCAGGAAAAGATGTGGTCGTCTCTCTTGATGATTTGCCACTCGAAAAAGA CCAATGGCCAAAAGTTGGTGACCAACTTTATGTGAAATTAATTATTGACAGAAAAGAGCGAATTTGGGGTCATTTAGCAT GGCATGAAGATTTCTGGAATCTTGCAGGTCCTGGTTATGATAACATGCAAAACCAAGATTTACGAGCAATTGTTTATCGA AATAAAGAATCAGGAACATTTGTTTATTTGCCTGACAACAATATGCTAGGATTTATTCATCCAAATGAACGTTTCTCAGT TCCACGTGTCGGCCAAGAACTTCAAGTTCGTGTTATTGGTTTTAGAAAAGAAGACCGTAGTCTAAATCTGTCAGCAAAAC CACGTGCTTATGAAATGCTTGATGCTGATAGCCAAATGATTTTAGCTTATCTTCAATCAATGGGCGGGAAAATGGCATTT AATGACAAATCAAATCCAGATGAAATAAAAGCAACTTTTGGAATCTCAAAAGGACAATTCAAAAAAGCGCTTGGTGGTTT GATGAAAGCTAAAAAAATCAAACAAAGTCCAGAGGGAACAGAATTAATCGGAGAATAA
Upstream 100 bases:
>100_bases CGGCTATCATCCTTGGGGTGAAAAATCACGGATTTACGAAGGAAATATCAATTAAACAGAGACAAATAGTCTCTCAATCA CATTTTATAAAGAGGTACAA
Downstream 100 bases:
>100_bases TTTACTAACAGCTTCTTTAGAAATACTAAGCTTAATTTAAAAGCATTTGTCAGTAAATTCTGTCAGTCTTATGACTTATA AAAATTTCTGTCAGTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSIIGQTISAIIVEESERFYFLQKGEDLLRLDKTEGEHTVGDVVTGFVYVDKDDHRRLTTLEQKATNEHYGWGTVTAVRK DLGAFVDTGLPGKDVVVSLDDLPLEKDQWPKVGDQLYVKLIIDRKERIWGHLAWHEDFWNLAGPGYDNMQNQDLRAIVYR NKESGTFVYLPDNNMLGFIHPNERFSVPRVGQELQVRVIGFRKEDRSLNLSAKPRAYEMLDADSQMILAYLQSMGGKMAF NDKSNPDEIKATFGISKGQFKKALGGLMKAKKIKQSPEGTELIGE
Sequences:
>Translated_285_residues MSIIGQTISAIIVEESERFYFLQKGEDLLRLDKTEGEHTVGDVVTGFVYVDKDDHRRLTTLEQKATNEHYGWGTVTAVRK DLGAFVDTGLPGKDVVVSLDDLPLEKDQWPKVGDQLYVKLIIDRKERIWGHLAWHEDFWNLAGPGYDNMQNQDLRAIVYR NKESGTFVYLPDNNMLGFIHPNERFSVPRVGQELQVRVIGFRKEDRSLNLSAKPRAYEMLDADSQMILAYLQSMGGKMAF NDKSNPDEIKATFGISKGQFKKALGGLMKAKKIKQSPEGTELIGE >Mature_284_residues SIIGQTISAIIVEESERFYFLQKGEDLLRLDKTEGEHTVGDVVTGFVYVDKDDHRRLTTLEQKATNEHYGWGTVTAVRKD LGAFVDTGLPGKDVVVSLDDLPLEKDQWPKVGDQLYVKLIIDRKERIWGHLAWHEDFWNLAGPGYDNMQNQDLRAIVYRN KESGTFVYLPDNNMLGFIHPNERFSVPRVGQELQVRVIGFRKEDRSLNLSAKPRAYEMLDADSQMILAYLQSMGGKMAFN DKSNPDEIKATFGISKGQFKKALGGLMKAKKIKQSPEGTELIGE
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32313; Mature: 32182
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIGQTISAIIVEESERFYFLQKGEDLLRLDKTEGEHTVGDVVTGFVYVDKDDHRRLTT CCCHHHCEEEEEEECCCEEEEEECCCCEEEECCCCCCCHHHHHEEEEEEECCCCCCHHHH LEQKATNEHYGWGTVTAVRKDLGAFVDTGLPGKDVVVSLDDLPLEKDQWPKVGDQLYVKL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE IIDRKERIWGHLAWHEDFWNLAGPGYDNMQNQDLRAIVYRNKESGTFVYLPDNNMLGFIH EECCCHHHHEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEC PNERFSVPRVGQELQVRVIGFRKEDRSLNLSAKPRAYEMLDADSQMILAYLQSMGGKMAF CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEHHCCCHHHHHHHHHHHCCEEEE NDKSNPDEIKATFGISKGQFKKALGGLMKAKKIKQSPEGTELIGE CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIIGQTISAIIVEESERFYFLQKGEDLLRLDKTEGEHTVGDVVTGFVYVDKDDHRRLTT CCHHHCEEEEEEECCCEEEEEECCCCEEEECCCCCCCHHHHHEEEEEEECCCCCCHHHH LEQKATNEHYGWGTVTAVRKDLGAFVDTGLPGKDVVVSLDDLPLEKDQWPKVGDQLYVKL HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE IIDRKERIWGHLAWHEDFWNLAGPGYDNMQNQDLRAIVYRNKESGTFVYLPDNNMLGFIH EECCCHHHHEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEC PNERFSVPRVGQELQVRVIGFRKEDRSLNLSAKPRAYEMLDADSQMILAYLQSMGGKMAF CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEHHCCCHHHHHHHHHHHCCEEEE NDKSNPDEIKATFGISKGQFKKALGGLMKAKKIKQSPEGTELIGE CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]