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The map label for this gene is pcaC

Identifier: 15673958

GI number: 15673958

Start: 2052244

End: 2052612

Strand: Reverse

Name: pcaC

Synonym: L35675

Alternate gene names: 15673958

Gene position: 2052612-2052244 (Counterclockwise)

Preceding gene: 15673960

Following gene: 15673955

Centisome position: 86.77

GC content: 34.15

Gene sequence:

>369_bases
ATGAATAAAAAAGAAATTGGTTTAAAAAATTTAGCGAAAATTGACGGAGCAGCTGCTGAAGTTGTTTTTGATTCACTCAA
AGACCTTGCACCAGACTTGAATAATCTGATGCTAAAATTTGCTTTTGGAACGATTTATGAGCGAGGAGTTCTCAATTTTA
AAGACCGTGAATTGATTACTATCACCAGTTTGTTGACTCAAGGAGGCTGTGAAAATCAATTGCGCGTGCATATTCAAGCT
TCGTTAAATGTTGGACTAACGCAAGAAGAAATTATTGAAACTTTTATTCACTATGCTCCTTATGTCGGTTTTCCAAGAGT
TTTAAATGCTATCTTTGTTGCTAAGGAAATTTTTACTGACAGAAAGTAA

Upstream 100 bases:

>100_bases
GAAATTTTATAAGTTTTAGTCATTTTTTTCTCTTTTTTGCTTGCCCTCAAGTTAACTTGAAGGTTTATAATGATTTTATC
ATAGAAAGCTGGTAAATAAA

Downstream 100 bases:

>100_bases
AAAAGTTACTGATGAATTTTTGTCATAGGATAGCTGTTACTGCTTTAGCAGTTTACAGATATGCTAGTAGTTTCATCAGT
AACTTTTTATTGCTCTTGTT

Product: gamma-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNKKEIGLKNLAKIDGAAAEVVFDSLKDLAPDLNNLMLKFAFGTIYERGVLNFKDRELITITSLLTQGGCENQLRVHIQA
SLNVGLTQEEIIETFIHYAPYVGFPRVLNAIFVAKEIFTDRK

Sequences:

>Translated_122_residues
MNKKEIGLKNLAKIDGAAAEVVFDSLKDLAPDLNNLMLKFAFGTIYERGVLNFKDRELITITSLLTQGGCENQLRVHIQA
SLNVGLTQEEIIETFIHYAPYVGFPRVLNAIFVAKEIFTDRK
>Mature_122_residues
MNKKEIGLKNLAKIDGAAAEVVFDSLKDLAPDLNNLMLKFAFGTIYERGVLNFKDRELITITSLLTQGGCENQLRVHIQA
SLNVGLTQEEIIETFIHYAPYVGFPRVLNAIFVAKEIFTDRK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13700; Mature: 13700

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKEIGLKNLAKIDGAAAEVVFDSLKDLAPDLNNLMLKFAFGTIYERGVLNFKDRELIT
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ITSLLTQGGCENQLRVHIQASLNVGLTQEEIIETFIHYAPYVGFPRVLNAIFVAKEIFTD
HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
RK
CC
>Mature Secondary Structure
MNKKEIGLKNLAKIDGAAAEVVFDSLKDLAPDLNNLMLKFAFGTIYERGVLNFKDRELIT
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ITSLLTQGGCENQLRVHIQASLNVGLTQEEIIETFIHYAPYVGFPRVLNAIFVAKEIFTD
HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]