| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yueF
Identifier: 15673955
GI number: 15673955
Start: 2049235
End: 2050491
Strand: Reverse
Name: yueF
Synonym: L32666
Alternate gene names: 15673955
Gene position: 2050491-2049235 (Counterclockwise)
Preceding gene: 15673958
Following gene: 15673954
Centisome position: 86.68
GC content: 35.16
Gene sequence:
>1257_bases ATGCTTCATCTCATTAAAGAAAGCAAATTTAAAACAGTAAGACTAATGGTTCGTTTTCGTGAAGAAATGTCAGCTGACAC CCTTGGGAAACGTGTCCTTATTTCTAATATGCTCGAAAGCACTAATGCGGTTTATCAAACCGGAAAAGATTTTAGTCGCA AATTATCTGAAATGTATGGCGCTTCGTTTACGACAGGAGTGGCTAAAAAAGGGAAACAACATTTACTTTCTCTTAATATG AGTATCGTAAATCCTAAACTTGTTGATTTTGATACTTTGGGAGCAGCAGTCGATTTCTTGAAAATTGCAATTTTTCAACC CGATGCTGCTAATGGTCAATTCAATCCCGAAATTTTCAAAAGAGAGCAAAGAAATTTATTGCATTATTTGGCCTCAATGA ATGATGACCGTTCTTATTATGCCAGCCGTCAGTTGGCTAATTTATTCTTTGAAGATGAGAATCAAGCATTACCAAGTGTT GGAACGAGCGAATTGATTGCCAAAGAAAATCCAAAAGCCGTTTTTGAATATTATCAAAAAATGCTGACAGACAATGCCAT TGATATCTTTGTCTTAGGTGATGTAGATGAAAAACGAATGATTGAACGATTCTCAGACTTCAATTTTACTGACAGAGCTG TCAGTAAAGAAATTTCTTATCAACAATCACTGACAGAAAGCTCAGTAGTGACAGATGAAAAAGAGGTGGCTCAATCTATT TTGCAATTCGCTTATCAAATGCCAATTGCTTATGGAGACAAAAACTACCTTGCTTTGCAAGTGATGAATGGACTTTTGGG AGGTTTTGCTCATTCAAAACTCTTTACCAATGTTCGGGAAAAAGCAAGTTTAGCCTATTCAATTTCTTCAACTTTTGATT CTTTCACAGGTTTTCTAAAAATTGCAGCTGGAATTGACGTTGAAAATTATGAAGAAGCCAAAAGTTTAATCTTTGAACAA TTAGAAGCCATAAAATCAGGAGATTTTACAGAATTAGAAGTTGAGCAAACCAAAACAATGTTACGAAATGCTTATTTTGT GGGGCAGGATTCGCCGTCAAACACAATTGAGTTAGAGTATGTAAAAGCACTTATTCCAGATAAATTTTTACCGATGTCTG AATTTTTAAATGCCCTCGAATCTGTTTCAAAAGCCGATTTGATTAGCGTTGCAAAATCATTAAATCTGCAGGCAGAATAC TTTATGAAAGGATTTACTGTGAATCAGGAAAAAATGGAGGTCAGCCTTGAAAAGTAA
Upstream 100 bases:
>100_bases AGTTTTTGGTATAATAAAGGTTGCCTTAATAACTAGAAAAAGCTTGATAAAATAGGAAAGTGATAGTCAATTGACAGAAA TTAAAATGGCAGATGGAGTG
Downstream 100 bases:
>100_bases GTTTTATGAAAAAATAGGTGAGAGATTATTTACAGATATTTTGCCTAATGGCTTGACAGTTTATTATCTTCCAAAAGCAG ATTACAATCGAACTTACGGC
Product: putative protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MLHLIKESKFKTVRLMVRFREEMSADTLGKRVLISNMLESTNAVYQTGKDFSRKLSEMYGASFTTGVAKKGKQHLLSLNM SIVNPKLVDFDTLGAAVDFLKIAIFQPDAANGQFNPEIFKREQRNLLHYLASMNDDRSYYASRQLANLFFEDENQALPSV GTSELIAKENPKAVFEYYQKMLTDNAIDIFVLGDVDEKRMIERFSDFNFTDRAVSKEISYQQSLTESSVVTDEKEVAQSI LQFAYQMPIAYGDKNYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDVENYEEAKSLIFEQ LEAIKSGDFTELEVEQTKTMLRNAYFVGQDSPSNTIELEYVKALIPDKFLPMSEFLNALESVSKADLISVAKSLNLQAEY FMKGFTVNQEKMEVSLEK
Sequences:
>Translated_418_residues MLHLIKESKFKTVRLMVRFREEMSADTLGKRVLISNMLESTNAVYQTGKDFSRKLSEMYGASFTTGVAKKGKQHLLSLNM SIVNPKLVDFDTLGAAVDFLKIAIFQPDAANGQFNPEIFKREQRNLLHYLASMNDDRSYYASRQLANLFFEDENQALPSV GTSELIAKENPKAVFEYYQKMLTDNAIDIFVLGDVDEKRMIERFSDFNFTDRAVSKEISYQQSLTESSVVTDEKEVAQSI LQFAYQMPIAYGDKNYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDVENYEEAKSLIFEQ LEAIKSGDFTELEVEQTKTMLRNAYFVGQDSPSNTIELEYVKALIPDKFLPMSEFLNALESVSKADLISVAKSLNLQAEY FMKGFTVNQEKMEVSLEK >Mature_418_residues MLHLIKESKFKTVRLMVRFREEMSADTLGKRVLISNMLESTNAVYQTGKDFSRKLSEMYGASFTTGVAKKGKQHLLSLNM SIVNPKLVDFDTLGAAVDFLKIAIFQPDAANGQFNPEIFKREQRNLLHYLASMNDDRSYYASRQLANLFFEDENQALPSV GTSELIAKENPKAVFEYYQKMLTDNAIDIFVLGDVDEKRMIERFSDFNFTDRAVSKEISYQQSLTESSVVTDEKEVAQSI LQFAYQMPIAYGDKNYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDVENYEEAKSLIFEQ LEAIKSGDFTELEVEQTKTMLRNAYFVGQDSPSNTIELEYVKALIPDKFLPMSEFLNALESVSKADLISVAKSLNLQAEY FMKGFTVNQEKMEVSLEK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 47307; Mature: 47307
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHLIKESKFKTVRLMVRFREEMSADTLGKRVLISNMLESTNAVYQTGKDFSRKLSEMYG CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC ASFTTGVAKKGKQHLLSLNMSIVNPKLVDFDTLGAAVDFLKIAIFQPDAANGQFNPEIFK CCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHEEECCCCCCCCCCHHHHH REQRNLLHYLASMNDDRSYYASRQLANLFFEDENQALPSVGTSELIAKENPKAVFEYYQK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH MLTDNAIDIFVLGDVDEKRMIERFSDFNFTDRAVSKEISYQQSLTESSVVTDEKEVAQSI HHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQFAYQMPIAYGDKNYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLK HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGIDVENYEEAKSLIFEQLEAIKSGDFTELEVEQTKTMLRNAYFVGQDSPSNTIELEY HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEECCCCCCCEEHHH VKALIPDKFLPMSEFLNALESVSKADLISVAKSLNLQAEYFMKGFTVNQEKMEVSLEK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHEECCC >Mature Secondary Structure MLHLIKESKFKTVRLMVRFREEMSADTLGKRVLISNMLESTNAVYQTGKDFSRKLSEMYG CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC ASFTTGVAKKGKQHLLSLNMSIVNPKLVDFDTLGAAVDFLKIAIFQPDAANGQFNPEIFK CCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHEEECCCCCCCCCCHHHHH REQRNLLHYLASMNDDRSYYASRQLANLFFEDENQALPSVGTSELIAKENPKAVFEYYQK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH MLTDNAIDIFVLGDVDEKRMIERFSDFNFTDRAVSKEISYQQSLTESSVVTDEKEVAQSI HHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQFAYQMPIAYGDKNYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLK HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGIDVENYEEAKSLIFEQLEAIKSGDFTELEVEQTKTMLRNAYFVGQDSPSNTIELEY HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEECCCCCCCEEHHH VKALIPDKFLPMSEFLNALESVSKADLISVAKSLNLQAEYFMKGFTVNQEKMEVSLEK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]