| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yueD
Identifier: 15673953
GI number: 15673953
Start: 2046854
End: 2047750
Strand: Reverse
Name: yueD
Synonym: L30285
Alternate gene names: 15673953
Gene position: 2047750-2046854 (Counterclockwise)
Preceding gene: 15673954
Following gene: 15673952
Centisome position: 86.56
GC content: 36.9
Gene sequence:
>897_bases ATGTTGACAATCAAAACAATCGGACAAGTCTTAAAAGAAAAGCGGACATCGCTTGGACTTGATCTTTCTGAAGCAGAACA ATTAACTCAAGTACAAAAATTATATATCGTAGCACTGGAGACAGATGACTATAAAGCCCTACCGGGTGACTTTTACATTA AAGCTTACCTCAAACATTATGCAGAAAAATTGGGGTTGAATGCAGATAGAATTATTCAAGCCTATGATGAAGGCAAAGGA ATCACAGTTGAGGATAAAGAGGACATCCTAGAAAATTATCATTTTGTGAAACCGAGTGAGCGAGTAGAACCTGAGGAAGA AGTGCCAAAAACATGGCGTCATTATGTACCAATTATTTCTTTATCAGCAGCGGCATTATTAATTGTAGTAGGTGTTTTTG CAGCGGTAATTATGAATAAACCAGAAACACCAGATTTAATAACCAATGATTATTCTTATTCAAAGAGTGAAGTTAGTACT TCTAAGTCTTCTACAAGCTCTACAAAACCATCAGAAAGTAGTACACAAGCAAGTAGTAGTACACCTGAACCAACAATTGC TATCTCAGGCTCAAGTTCGGCAATGATTGCCACAATTTCTAATATTTCTGACCCTATAAAAGTTGATTTTTCAGTTGCAG CAGGACGAACAATTTGGGTTGGCATGACGAATTCCAATGTTCCAGCAACTGGTCAAACATTATCTGATGGAGCCAATAGT CTGTCTGCTTTAGTGACAACAGGCTCAGAAAATTCAGTAATTACACTTGGAAGTGTTGAAGGGCTTACCATTACGGTTAA TGGAAAAGCTCTTGATTTATCATCACTAACCACAACTGGACCAAATAAAATTACTTTACAAATTAATCGAACGACAAGCA ATTCAGCTGCTCAATAA
Upstream 100 bases:
>100_bases GTCAGCGCAATTTCTAAGGCGAGATAGTAAAAATCTCCAAAATAAACAAAGAACAGTGATAATTAACAATCGATGTGCAG TACAAAAATGAAGGGAGGAT
Downstream 100 bases:
>100_bases ATAAAAGCTGAGGCTTATTTTAAGTTGCAAAAGGAGAACTATGAAAGAGAAAATACCCAATCAATTGACAATGGCAAGGA TTTTTATGATTCCAATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MLTIKTIGQVLKEKRTSLGLDLSEAEQLTQVQKLYIVALETDDYKALPGDFYIKAYLKHYAEKLGLNADRIIQAYDEGKG ITVEDKEDILENYHFVKPSERVEPEEEVPKTWRHYVPIISLSAAALLIVVGVFAAVIMNKPETPDLITNDYSYSKSEVST SKSSTSSTKPSESSTQASSSTPEPTIAISGSSSAMIATISNISDPIKVDFSVAAGRTIWVGMTNSNVPATGQTLSDGANS LSALVTTGSENSVITLGSVEGLTITVNGKALDLSSLTTTGPNKITLQINRTTSNSAAQ
Sequences:
>Translated_298_residues MLTIKTIGQVLKEKRTSLGLDLSEAEQLTQVQKLYIVALETDDYKALPGDFYIKAYLKHYAEKLGLNADRIIQAYDEGKG ITVEDKEDILENYHFVKPSERVEPEEEVPKTWRHYVPIISLSAAALLIVVGVFAAVIMNKPETPDLITNDYSYSKSEVST SKSSTSSTKPSESSTQASSSTPEPTIAISGSSSAMIATISNISDPIKVDFSVAAGRTIWVGMTNSNVPATGQTLSDGANS LSALVTTGSENSVITLGSVEGLTITVNGKALDLSSLTTTGPNKITLQINRTTSNSAAQ >Mature_298_residues MLTIKTIGQVLKEKRTSLGLDLSEAEQLTQVQKLYIVALETDDYKALPGDFYIKAYLKHYAEKLGLNADRIIQAYDEGKG ITVEDKEDILENYHFVKPSERVEPEEEVPKTWRHYVPIISLSAAALLIVVGVFAAVIMNKPETPDLITNDYSYSKSEVST SKSSTSSTKPSESSTQASSSTPEPTIAISGSSSAMIATISNISDPIKVDFSVAAGRTIWVGMTNSNVPATGQTLSDGANS LSALVTTGSENSVITLGSVEGLTITVNGKALDLSSLTTTGPNKITLQINRTTSNSAAQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31871; Mature: 31871
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIKTIGQVLKEKRTSLGLDLSEAEQLTQVQKLYIVALETDDYKALPGDFYIKAYLKHY CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEECCCCEECCCHHHHHHHHHHH AEKLGLNADRIIQAYDEGKGITVEDKEDILENYHFVKPSERVEPEEEVPKTWRHYVPIIS HHHHCCCHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCHHH LSAAALLIVVGVFAAVIMNKPETPDLITNDYSYSKSEVSTSKSSTSSTKPSESSTQASSS HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC TPEPTIAISGSSSAMIATISNISDPIKVDFSVAAGRTIWVGMTNSNVPATGQTLSDGANS CCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHCCHHC LSALVTTGSENSVITLGSVEGLTITVNGKALDLSSLTTTGPNKITLQINRTTSNSAAQ EEEEEEECCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MLTIKTIGQVLKEKRTSLGLDLSEAEQLTQVQKLYIVALETDDYKALPGDFYIKAYLKHY CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEECCCCEECCCHHHHHHHHHHH AEKLGLNADRIIQAYDEGKGITVEDKEDILENYHFVKPSERVEPEEEVPKTWRHYVPIIS HHHHCCCHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCHHH LSAAALLIVVGVFAAVIMNKPETPDLITNDYSYSKSEVSTSKSSTSSTKPSESSTQASSS HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC TPEPTIAISGSSSAMIATISNISDPIKVDFSVAAGRTIWVGMTNSNVPATGQTLSDGANS CCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHCCHHC LSALVTTGSENSVITLGSVEGLTITVNGKALDLSSLTTTGPNKITLQINRTTSNSAAQ EEEEEEECCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]