Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yudF

Identifier: 15673940

GI number: 15673940

Start: 2033751

End: 2034074

Strand: Reverse

Name: yudF

Synonym: L17182

Alternate gene names: NA

Gene position: 2034074-2033751 (Counterclockwise)

Preceding gene: 15673944

Following gene: 15673939

Centisome position: 85.99

GC content: 33.95

Gene sequence:

>324_bases
ATGGAATTTGAAGATTATTTTAAAAATGATGAGTTAATGAACACTGTCAGAGAAACTGTAAAATTGGTCTTTCCTGAAGC
ACAAGAACGTATTTCCTACGGAATGCCTGCATGGTTTAAGGATAAGAATGTCCTTATTTATGCAAGTCCTCAAAAAAAGC
ACTTAGGAATTTATCCCAAACCAAACTTCATTGAAAATAATAGTGCGTCTCTTAAAGAACAATACGAATGCAGTAAAGTG
ACCATAAAAGTCCCTTATGATGTTGAAACCAATGAACTCAAACGCTTAGTTAGTGAGATTGTAAAATGGAACTTGGGCCA
TTAA

Upstream 100 bases:

>100_bases
AAGGATTTTGATAAACTAATAGCAGTAAATAAATTTTTTTTTGAACATATTATTACTAAAAACAACAAAAAAATGATAAT
GAAGATGAGAGAGGCCTGCT

Downstream 100 bases:

>100_bases
ATTTAACTGGTGTTTTGATAATAAACTATAAAAATTATTTGTATTTGTAAATTTATGTATCCTGAAACCAATTATTAAAA
GAAAGAATGTGAATTATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV
TIKVPYDVETNELKRLVSEIVKWNLGH

Sequences:

>Translated_107_residues
MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV
TIKVPYDVETNELKRLVSEIVKWNLGH
>Mature_107_residues
MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPKPNFIENNSASLKEQYECSKV
TIKVPYDVETNELKRLVSEIVKWNLGH

Specific function: Unknown

COG id: COG5646

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12632; Mature: 12632

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPK
CCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCC
PNFIENNSASLKEQYECSKVTIKVPYDVETNELKRLVSEIVKWNLGH
CCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFEDYFKNDELMNTVRETVKLVFPEAQERISYGMPAWFKDKNVLIYASPQKKHLGIYPK
CCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCC
PNFIENNSASLKEQYECSKVTIKVPYDVETNELKRLVSEIVKWNLGH
CCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA