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The map label for this gene is yuaA

Identifier: 15673904

GI number: 15673904

Start: 2000601

End: 2001545

Strand: Reverse

Name: yuaA

Synonym: L184033

Alternate gene names: 15673904

Gene position: 2001545-2000601 (Counterclockwise)

Preceding gene: 15673905

Following gene: 15673903

Centisome position: 84.61

GC content: 36.4

Gene sequence:

>945_bases
ATGGTGCTCATTAAAAACTTAGAAATTGGCGAATTTTTTGAAGGGTTTTATCTGATTAAATCAGTTGAATTACGTCAAAC
TCGTGCAGGAAAAGACTTTTTAGCTTTAAGTTTTCAAGACCGAACAGGAACAATCAACGGAAATATTTGGGATGCCAATC
CTAAGGCGGTTGAACAATTTAGAGCTGGACGTGTCGTACATATGAAGGCTCTCAAAGAACTTTATAATGGAATGCCTCAA
GTCAATAAAATACAATTACGTTTGGCGACAGATAGTGAACCTAATCAACCTCATGATTACCGAGAAAGTTCTCCTGTTCA
AGAAAAAGATCTACGTGAATATGTTCAATCAATCGTCTTCCGTATTGAAAATGCGACTTTAAATCGAATTGTACGAACGA
TTTTGAAAAAATTTGATAAAGAATTTTATGAATTTCCTGCTGCAAAAACTAATCACCATGCTTTTGAAGGAGGTCTTGCT
TTCCATACAACCACCATGCTTCAATTAGCAGAAAAAGTTTGCGAAGTTTATCCACAACTCAACGAAAATTTGATGTTTGC
CGGTGTTTTACTGCATGATATGGCAAAATGTTTAGAGTTTACAGGTGCGGAAAATACTTCTTATACTTTGCGCGGAAATT
TGCTTGGGCACATTGTTTTGATTGATGAAGAAGTGAGTAAAGCCGCCATTGAACTTGGCTTTGATGATGACAATGAAGAT
TTATTAATGCTTCGTCATTGTTTGTTGAGTCATCATGGTGAGTTGGAATATGGTAGCCCTGTTCGTCCGCAAATTATGGA
AGCAGAAATGATTCATCAAATTGATGTTATGGATGCCAATATGATGATGATGACTACGGCGACTCAAACGCTTGACCCAG
GTCAATTTAGTCAACGCGTTTGGGCTTTATCTAATCGTAATTTTTATAAACCAAGAAAAGATTAA

Upstream 100 bases:

>100_bases
TCGGGCTCGTAGAAGCGTGTGAAATAGGAACTGGATTATATTCAGAACCACAATTTCCATCACTTCTGAATGCTCGTACT
CACATCTTAAAGGAGAAAAC

Downstream 100 bases:

>100_bases
ACCGTGGCGCATGGTTCAAGTGAATAAAAAAGCTGTTTTGCACCTAAATTTGAACAATTTGGTGTGGAACAGCTTCGCAC
TTCATGCTAGGCTTTCCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MVLIKNLEIGEFFEGFYLIKSVELRQTRAGKDFLALSFQDRTGTINGNIWDANPKAVEQFRAGRVVHMKALKELYNGMPQ
VNKIQLRLATDSEPNQPHDYRESSPVQEKDLREYVQSIVFRIENATLNRIVRTILKKFDKEFYEFPAAKTNHHAFEGGLA
FHTTTMLQLAEKVCEVYPQLNENLMFAGVLLHDMAKCLEFTGAENTSYTLRGNLLGHIVLIDEEVSKAAIELGFDDDNED
LLMLRHCLLSHHGELEYGSPVRPQIMEAEMIHQIDVMDANMMMMTTATQTLDPGQFSQRVWALSNRNFYKPRKD

Sequences:

>Translated_314_residues
MVLIKNLEIGEFFEGFYLIKSVELRQTRAGKDFLALSFQDRTGTINGNIWDANPKAVEQFRAGRVVHMKALKELYNGMPQ
VNKIQLRLATDSEPNQPHDYRESSPVQEKDLREYVQSIVFRIENATLNRIVRTILKKFDKEFYEFPAAKTNHHAFEGGLA
FHTTTMLQLAEKVCEVYPQLNENLMFAGVLLHDMAKCLEFTGAENTSYTLRGNLLGHIVLIDEEVSKAAIELGFDDDNED
LLMLRHCLLSHHGELEYGSPVRPQIMEAEMIHQIDVMDANMMMMTTATQTLDPGQFSQRVWALSNRNFYKPRKD
>Mature_314_residues
MVLIKNLEIGEFFEGFYLIKSVELRQTRAGKDFLALSFQDRTGTINGNIWDANPKAVEQFRAGRVVHMKALKELYNGMPQ
VNKIQLRLATDSEPNQPHDYRESSPVQEKDLREYVQSIVFRIENATLNRIVRTILKKFDKEFYEFPAAKTNHHAFEGGLA
FHTTTMLQLAEKVCEVYPQLNENLMFAGVLLHDMAKCLEFTGAENTSYTLRGNLLGHIVLIDEEVSKAAIELGFDDDNED
LLMLRHCLLSHHGELEYGSPVRPQIMEAEMIHQIDVMDANMMMMTTATQTLDPGQFSQRVWALSNRNFYKPRKD

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 36077; Mature: 36077

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLIKNLEIGEFFEGFYLIKSVELRQTRAGKDFLALSFQDRTGTINGNIWDANPKAVEQF
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCEECCCHHHHHHH
RAGRVVHMKALKELYNGMPQVNKIQLRLATDSEPNQPHDYRESSPVQEKDLREYVQSIVF
HCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RIENATLNRIVRTILKKFDKEFYEFPAAKTNHHAFEGGLAFHTTTMLQLAEKVCEVYPQL
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NENLMFAGVLLHDMAKCLEFTGAENTSYTLRGNLLGHIVLIDEEVSKAAIELGFDDDNED
CCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCHHEEEECCCCCCCH
LLMLRHCLLSHHGELEYGSPVRPQIMEAEMIHQIDVMDANMMMMTTATQTLDPGQFSQRV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
WALSNRNFYKPRKD
HHCCCCCCCCCCCC
>Mature Secondary Structure
MVLIKNLEIGEFFEGFYLIKSVELRQTRAGKDFLALSFQDRTGTINGNIWDANPKAVEQF
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCEECCCHHHHHHH
RAGRVVHMKALKELYNGMPQVNKIQLRLATDSEPNQPHDYRESSPVQEKDLREYVQSIVF
HCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RIENATLNRIVRTILKKFDKEFYEFPAAKTNHHAFEGGLAFHTTTMLQLAEKVCEVYPQL
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NENLMFAGVLLHDMAKCLEFTGAENTSYTLRGNLLGHIVLIDEEVSKAAIELGFDDDNED
CCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCHHEEEECCCCCCCH
LLMLRHCLLSHHGELEYGSPVRPQIMEAEMIHQIDVMDANMMMMTTATQTLDPGQFSQRV
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
WALSNRNFYKPRKD
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]