| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ytjH
Identifier: 15673903
GI number: 15673903
Start: 1999580
End: 2000287
Strand: Reverse
Name: ytjH
Synonym: L183012
Alternate gene names: 15673903
Gene position: 2000287-1999580 (Counterclockwise)
Preceding gene: 15673904
Following gene: 15673902
Centisome position: 84.56
GC content: 34.32
Gene sequence:
>708_bases ATGAATTACACTTTAAAAAATGACCACTTAAATGTTGTTGTGGATACTTTTGGAGCAGAAATGCATTCTATTCAACATGA TGATATTGAATATTTGTGGCAAGCAGATGCAAAATTTTGGGGCCGTCATGCTCCAGTTCTCTTTCCAATCGTAGGGAAAT TGAAAAATGGGGAATATCGCTATAATGACAAAACTTATAAAATGGGCGGACACGGTTTTGCACGTGATAATGACTTTGAA TTAATTAAGAAATCAGCTGATGAACTTGTTTTTGAACTTCGTGACAATGAAGATAGCTTAAATCACTATCCCTTTCATTT TGTTTTCCGTGTTTCTTATAAACTAGTAGACAATAAAATTAGAGTTCGTTATGAAGTGAAAAATGAAGATGAAAAATTCA TGTCTTTTGGCGTTGGGGCTCACCCAGCTTTCAATGTTCCTTTAAAAAATGGAACTTTTGAAGATTACCAATTAACAATT TCACCAGATGAAAAGCGGACATTTATTCCACTTGATCCACCGTCAGGAACTTTGAAACTAGATGAAAGAGTTGAAAGTCA AGTCAGTCAACTTCCGTTAACAAGAGCACTTTTTGATAAAGATGCTTTAGTTTATACCTCATCAAAGGAGATGAAAGTTT CTTTGACCAATAAATTAGATGACCACGGAGTCAGCCTAACATGGAAAAATATGCCTTATTTTGGTTAA
Upstream 100 bases:
>100_bases TCAACATTCTGAAGTGTGACGTACATTTTTTTACTGACAGAAATTTTTGTCAGTAAAAATGGTAAAATAGAGGAAGTTAA AAAAATATAAGGAGTTTTTT
Downstream 100 bases:
>100_bases TGGTCACCTTATCCAAATGAAGCACCCTTTGTTTGTATCGAACCTTGGTGTGGAATTGCAGATGATGAAAATACTGATGG AGATATTACCAACAAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNYTLKNDHLNVVVDTFGAEMHSIQHDDIEYLWQADAKFWGRHAPVLFPIVGKLKNGEYRYNDKTYKMGGHGFARDNDFE LIKKSADELVFELRDNEDSLNHYPFHFVFRVSYKLVDNKIRVRYEVKNEDEKFMSFGVGAHPAFNVPLKNGTFEDYQLTI SPDEKRTFIPLDPPSGTLKLDERVESQVSQLPLTRALFDKDALVYTSSKEMKVSLTNKLDDHGVSLTWKNMPYFG
Sequences:
>Translated_235_residues MNYTLKNDHLNVVVDTFGAEMHSIQHDDIEYLWQADAKFWGRHAPVLFPIVGKLKNGEYRYNDKTYKMGGHGFARDNDFE LIKKSADELVFELRDNEDSLNHYPFHFVFRVSYKLVDNKIRVRYEVKNEDEKFMSFGVGAHPAFNVPLKNGTFEDYQLTI SPDEKRTFIPLDPPSGTLKLDERVESQVSQLPLTRALFDKDALVYTSSKEMKVSLTNKLDDHGVSLTWKNMPYFG >Mature_235_residues MNYTLKNDHLNVVVDTFGAEMHSIQHDDIEYLWQADAKFWGRHAPVLFPIVGKLKNGEYRYNDKTYKMGGHGFARDNDFE LIKKSADELVFELRDNEDSLNHYPFHFVFRVSYKLVDNKIRVRYEVKNEDEKFMSFGVGAHPAFNVPLKNGTFEDYQLTI SPDEKRTFIPLDPPSGTLKLDERVESQVSQLPLTRALFDKDALVYTSSKEMKVSLTNKLDDHGVSLTWKNMPYFG
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 27296; Mature: 27296
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTLKNDHLNVVVDTFGAEMHSIQHDDIEYLWQADAKFWGRHAPVLFPIVGKLKNGEYR CCCEECCCCEEEEEEECCCHHHCCCCCCHHHHHHCCHHHCCCCCCEEEEEEEECCCCEEE YNDKTYKMGGHGFARDNDFELIKKSADELVFELRDNEDSLNHYPFHFVFRVSYKLVDNKI ECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEEECCEE RVRYEVKNEDEKFMSFGVGAHPAFNVPLKNGTFEDYQLTISPDEKRTFIPLDPPSGTLKL EEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEE DERVESQVSQLPLTRALFDKDALVYTSSKEMKVSLTNKLDDHGVSLTWKNMPYFG HHHHHHHHHHCCHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MNYTLKNDHLNVVVDTFGAEMHSIQHDDIEYLWQADAKFWGRHAPVLFPIVGKLKNGEYR CCCEECCCCEEEEEEECCCHHHCCCCCCHHHHHHCCHHHCCCCCCEEEEEEEECCCCEEE YNDKTYKMGGHGFARDNDFELIKKSADELVFELRDNEDSLNHYPFHFVFRVSYKLVDNKI ECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEEECCEE RVRYEVKNEDEKFMSFGVGAHPAFNVPLKNGTFEDYQLTISPDEKRTFIPLDPPSGTLKL EEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEE DERVESQVSQLPLTRALFDKDALVYTSSKEMKVSLTNKLDDHGVSLTWKNMPYFG HHHHHHHHHHCCHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]