Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is ythB

Identifier: 15673887

GI number: 15673887

Start: 1974300

End: 1974503

Strand: Reverse

Name: ythB

Synonym: L157730

Alternate gene names: NA

Gene position: 1974503-1974300 (Counterclockwise)

Preceding gene: 15673888

Following gene: 15673886

Centisome position: 83.47

GC content: 42.65

Gene sequence:

>204_bases
ATGGCTAAGAAAACTCTGAAAAGATCAAGTAGCAATCGAGTCATCGCAGGAACCGTCGGGGGACTTGGTGAATACTTTGG
CTTGAGCCGTACAGTAATTAATGTAATTCGGGTTCTGATTGTGCTTGGTACTTTCGGAAGTTGGGGAACATTACTCATTG
TTTATGTGATTGCGAGTCTATTGATGACACCGTCACAAGGTTAA

Upstream 100 bases:

>100_bases
AAAGATACTGAAACTACTGACAAAGAAGAAACTGAATAAAATTTTACTGACAGAAATTTTATAAGAGTTCTGTCAGTAAA
TTTGAAAAGAAAGGTGAGAA

Downstream 100 bases:

>100_bases
TTCAACGATTATGAAGAAAGGATAAATTATGTCTCAAAGACAATTAACAAAATCAGTGACAAATCGTAGAGTCAGTGGTG
TCATTGCAGGGATTGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG

Sequences:

>Translated_67_residues
MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG
>Mature_66_residues
AKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASLLMTPSQG

Specific function: Unknown

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7113; Mature: 6981

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASL
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LMTPSQG
HCCCCCC
>Mature Secondary Structure 
AKKTLKRSSSNRVIAGTVGGLGEYFGLSRTVINVIRVLIVLGTFGSWGTLLIVYVIASL
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LMTPSQG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA