| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is pepO
Identifier: 15673785
GI number: 15673785
Start: 1866399
End: 1868282
Strand: Direct
Name: pepO
Synonym: L49741
Alternate gene names: 15673785
Gene position: 1866399-1868282 (Clockwise)
Preceding gene: 15673784
Following gene: 15673788
Centisome position: 78.9
GC content: 35.24
Gene sequence:
>1884_bases ATGACAAGGATTCAAGATGATTTATTCGCTACTGTTAATGCTGAATGGTTAGAAAATGCAGAAATTCCTGCAGACAAACC AAGAATTTCAGCTTTTGATGAATTAGTACTAAAAAATGAGAAAAATTTGGCTAAAGATTTAGCTGATTTATCACAAAACC TACCTACTGATAATCCAGAGTTGCTTGAAGCAATCAAATTTTATAATAAAGCAGGAGATTGGCAAACCAGAGAAAAAGCG GACTTTTCTGCCGTAAAAAATGAACTTGCTAAAGTTGAAACTTTAAATACTTTTGAAGATTTTAAAAATAATTTGACTCA ACTCGTTTTCCATTCACAGGCACCTCTTCCGTTTTCTTTTAGTGTTGAACCTGATATGAAAGATGCTATTCACTATTCTC TTGGATTCTCTGGCCCGGGTTTGATTTTACCTGATACCACTTATTATAATGATGAACACCCTAGAAAAAAAGAATTACTT GATTTTTGGGCTAAAAATACAAGCGAAATTTTAAAGACATTTGATGTTGAAAATGCAGAAGAGATTGCAAAGTCTGCCCT TAAATTCGATGCTCTTTTAGTTCCATCAGCAAATACTTCTGAAGAGTGGGCAAAATATGCTGAACTTTATCATCCAATTT CTACTGACAGCTTTGTCAGTAAAGTTAAAAACCTGGATTTAAAATCTTTAATTAAAGATTTAGTAAAAACTGAACCTGAT AAAGTCATTGTTTACGAAGATCGTTTTTATGAATCATTTGATTCACTTATCAATGAAGAAAATTGGTCACTCATTAAAGC TTGGATGCTGACAAAAATTGCACGTGGCGCTACTTCTTTCTTCAATGAAGACCTTAGAATTCTTGGTGGAGCTTATGGAC GTTTCCTTTCAAATGTTCAAGAAGCAAGAAGTCAAGAAAAACATCAACTTGATTTGACTGAGTCTTATTTTAGCCAAGTG ATTGGTTTATTCTATGGTAAAAAATATTTTGGTGAAGCTGCTAAGGCCGATGTCAAACGGATGGTCACTGCAATGATTAA AGTTTACCAAGCGCGTTTGTCTAAAAATGAGTGGCTCAGTCAAGAAACAGCTGAAAAAGCCATTGAAAAATTGGATGCTA TTACTCCTTTCATTGGTTTCCCAGATAAATTGCCTGAAATTTATAGTCGTTTAAAAACAACTTCTGGCTCTCTCTATGAA GATGCCCTTAAATTCGATGAAATTTTGACTGCTCGAACTTTTGAAAAATTCTCAGAAGATGTTGATAAAACAAGCTGGCA TATGCCTGCTCATATGGTCAATGCTTATTATAGTCCTGATAGTAATACAATTGTTTTTCCAGCAGCAATTTTGCAAGCTC CTTTTTACTCTCTTGAACAATCTTCATCACAAAATTACGGTGGAATCGGCACAGTTATTGCTCACGAAATTTCTCACGCT TTTGATAACAACGGTGCCCAATTCGATAAAGAAGGAAATTTGAACAAATGGTGGTTAGATGAAGATTATGAAGCTTTTGA AGAAAAGCAAAAAGAAATGATTGCACTCTTTGACGGCGTAGAAACCGAAGCTGGTCCAGCAAACGGAAAACTCATTGTGT CAGAAAATATTGCTGACCAAGGAGGAATTACAGCGGCACTGACAGCAGCTAAAGATGAGAAAGACGTTGATTTGAAGGCT TTCTTTAGTCAGTGGGCTAAGATTTGGCGCATGAAAGCAAGTAAAGAATTCCAACAAATGCTTTTGTCAATGGATGTTCA TGCACCCGCTAAACTTCGTGCCAATATTCCTCCAACAAATCTCGAAGAGTTTTACGAAACTTTTGATGTTAAAGAAACTG ATAAGATGTATCGTGCACCAGAAAATCGTCTTAAAATTTGGTAA
Upstream 100 bases:
>100_bases ATTAATTTTCAAATTGCTGTTAAAAAGTGCTGATGGAATTCGTCAGCGCTTTTTTGTAAGTATGATATAATATAAAAAAT ATCCATAATAGGAGGTCGAT
Downstream 100 bases:
>100_bases TAGTTAATTGAATACAAAAAGTACTTCTAAAATATAGAAGTACTTTTTATTTATTAGAGCAGTTCATCTTCAATAATTAT TTTCCCTTGAGCTGTAAAAG
Product: neutral endopeptidase
Products: NA
Alternate protein names: Endopeptidase O
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MTRIQDDLFATVNAEWLENAEIPADKPRISAFDELVLKNEKNLAKDLADLSQNLPTDNPELLEAIKFYNKAGDWQTREKA DFSAVKNELAKVETLNTFEDFKNNLTQLVFHSQAPLPFSFSVEPDMKDAIHYSLGFSGPGLILPDTTYYNDEHPRKKELL DFWAKNTSEILKTFDVENAEEIAKSALKFDALLVPSANTSEEWAKYAELYHPISTDSFVSKVKNLDLKSLIKDLVKTEPD KVIVYEDRFYESFDSLINEENWSLIKAWMLTKIARGATSFFNEDLRILGGAYGRFLSNVQEARSQEKHQLDLTESYFSQV IGLFYGKKYFGEAAKADVKRMVTAMIKVYQARLSKNEWLSQETAEKAIEKLDAITPFIGFPDKLPEIYSRLKTTSGSLYE DALKFDEILTARTFEKFSEDVDKTSWHMPAHMVNAYYSPDSNTIVFPAAILQAPFYSLEQSSSQNYGGIGTVIAHEISHA FDNNGAQFDKEGNLNKWWLDEDYEAFEEKQKEMIALFDGVETEAGPANGKLIVSENIADQGGITAALTAAKDEKDVDLKA FFSQWAKIWRMKASKEFQQMLLSMDVHAPAKLRANIPPTNLEEFYETFDVKETDKMYRAPENRLKIW
Sequences:
>Translated_627_residues MTRIQDDLFATVNAEWLENAEIPADKPRISAFDELVLKNEKNLAKDLADLSQNLPTDNPELLEAIKFYNKAGDWQTREKA DFSAVKNELAKVETLNTFEDFKNNLTQLVFHSQAPLPFSFSVEPDMKDAIHYSLGFSGPGLILPDTTYYNDEHPRKKELL DFWAKNTSEILKTFDVENAEEIAKSALKFDALLVPSANTSEEWAKYAELYHPISTDSFVSKVKNLDLKSLIKDLVKTEPD KVIVYEDRFYESFDSLINEENWSLIKAWMLTKIARGATSFFNEDLRILGGAYGRFLSNVQEARSQEKHQLDLTESYFSQV IGLFYGKKYFGEAAKADVKRMVTAMIKVYQARLSKNEWLSQETAEKAIEKLDAITPFIGFPDKLPEIYSRLKTTSGSLYE DALKFDEILTARTFEKFSEDVDKTSWHMPAHMVNAYYSPDSNTIVFPAAILQAPFYSLEQSSSQNYGGIGTVIAHEISHA FDNNGAQFDKEGNLNKWWLDEDYEAFEEKQKEMIALFDGVETEAGPANGKLIVSENIADQGGITAALTAAKDEKDVDLKA FFSQWAKIWRMKASKEFQQMLLSMDVHAPAKLRANIPPTNLEEFYETFDVKETDKMYRAPENRLKIW >Mature_626_residues TRIQDDLFATVNAEWLENAEIPADKPRISAFDELVLKNEKNLAKDLADLSQNLPTDNPELLEAIKFYNKAGDWQTREKAD FSAVKNELAKVETLNTFEDFKNNLTQLVFHSQAPLPFSFSVEPDMKDAIHYSLGFSGPGLILPDTTYYNDEHPRKKELLD FWAKNTSEILKTFDVENAEEIAKSALKFDALLVPSANTSEEWAKYAELYHPISTDSFVSKVKNLDLKSLIKDLVKTEPDK VIVYEDRFYESFDSLINEENWSLIKAWMLTKIARGATSFFNEDLRILGGAYGRFLSNVQEARSQEKHQLDLTESYFSQVI GLFYGKKYFGEAAKADVKRMVTAMIKVYQARLSKNEWLSQETAEKAIEKLDAITPFIGFPDKLPEIYSRLKTTSGSLYED ALKFDEILTARTFEKFSEDVDKTSWHMPAHMVNAYYSPDSNTIVFPAAILQAPFYSLEQSSSQNYGGIGTVIAHEISHAF DNNGAQFDKEGNLNKWWLDEDYEAFEEKQKEMIALFDGVETEAGPANGKLIVSENIADQGGITAALTAAKDEKDVDLKAF FSQWAKIWRMKASKEFQQMLLSMDVHAPAKLRANIPPTNLEEFYETFDVKETDKMYRAPENRLKIW
Specific function: Endopeptidase with broad substrate specificity for several oligopeptides
COG id: COG3590
COG function: function code O; Predicted metalloendopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M13 family
Homologues:
Organism=Homo sapiens, GI164519138, Length=659, Percent_Identity=25.3414264036419, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI164519140, Length=659, Percent_Identity=25.3414264036419, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI164519136, Length=659, Percent_Identity=25.3414264036419, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI4503443, Length=659, Percent_Identity=25.3414264036419, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI239049391, Length=677, Percent_Identity=27.178729689808, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI153945761, Length=660, Percent_Identity=23.9393939393939, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI82617560, Length=660, Percent_Identity=23.7878787878788, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI153945836, Length=660, Percent_Identity=23.9393939393939, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI153945771, Length=660, Percent_Identity=23.9393939393939, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI157426891, Length=665, Percent_Identity=23.0075187969925, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI116256333, Length=330, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI116256331, Length=330, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI116256329, Length=330, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI116256327, Length=330, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI90403592, Length=690, Percent_Identity=23.9130434782609, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI4557691, Length=357, Percent_Identity=24.3697478991597, Blast_Score=97, Evalue=4e-20, Organism=Caenorhabditis elegans, GI86562497, Length=683, Percent_Identity=25.7686676427526, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI25148650, Length=683, Percent_Identity=26.0614934114202, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17533333, Length=404, Percent_Identity=26.4851485148515, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI32563993, Length=310, Percent_Identity=29.3548387096774, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17564342, Length=433, Percent_Identity=26.5588914549654, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI71987442, Length=548, Percent_Identity=23.9051094890511, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17534401, Length=322, Percent_Identity=27.639751552795, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17570047, Length=600, Percent_Identity=22.3333333333333, Blast_Score=119, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71998977, Length=293, Percent_Identity=27.3037542662116, Blast_Score=97, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71998975, Length=293, Percent_Identity=27.3037542662116, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71988640, Length=236, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994787, Length=324, Percent_Identity=21.9135802469136, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17533319, Length=352, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17532485, Length=279, Percent_Identity=24.7311827956989, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24643425, Length=664, Percent_Identity=24.2469879518072, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI45551938, Length=536, Percent_Identity=25.5597014925373, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI45550777, Length=536, Percent_Identity=25.5597014925373, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI17737761, Length=471, Percent_Identity=28.4501061571125, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24640050, Length=659, Percent_Identity=23.3687405159332, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24640052, Length=659, Percent_Identity=23.3687405159332, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24650487, Length=369, Percent_Identity=24.390243902439, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI221474862, Length=365, Percent_Identity=24.9315068493151, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24650765, Length=271, Percent_Identity=26.1992619926199, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI281362760, Length=354, Percent_Identity=25.1412429378531, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24650885, Length=348, Percent_Identity=26.4367816091954, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24650889, Length=349, Percent_Identity=24.3553008595989, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI21355943, Length=359, Percent_Identity=22.2841225626741, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24641622, Length=202, Percent_Identity=29.7029702970297, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PEPO_LACLA (Q07744)
Other databases:
- EMBL: L18760 - EMBL: AE005176 - PIR: C86850 - PIR: F53290 - RefSeq: NP_267960.1 - ProteinModelPortal: Q07744 - SMR: Q07744 - GeneID: 1115468 - GenomeReviews: AE005176_GR - KEGG: lla:L49741 - NMPDR: fig|272623.1.peg.1849 - HOGENOM: HBG701001 - OMA: NGICGED - ProtClustDB: CLSK871767 - BioCyc: LLAC272623:L49741-MONOMER - GO: GO:0006508 - InterPro: IPR000718 - InterPro: IPR018497 - InterPro: IPR008753 - PANTHER: PTHR11733 - PRINTS: PR00786
Pfam domain/function: PF01431 Peptidase_M13; PF05649 Peptidase_M13_N
EC number: NA
Molecular weight: Translated: 71538; Mature: 71407
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 476-476 ACT_SITE 539-539
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIQDDLFATVNAEWLENAEIPADKPRISAFDELVLKNEKNLAKDLADLSQNLPTDNPE CCCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH LLEAIKFYNKAGDWQTREKADFSAVKNELAKVETLNTFEDFKNNLTQLVFHSQAPLPFSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SVEPDMKDAIHYSLGFSGPGLILPDTTYYNDEHPRKKELLDFWAKNTSEILKTFDVENAE CCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHH EIAKSALKFDALLVPSANTSEEWAKYAELYHPISTDSFVSKVKNLDLKSLIKDLVKTEPD HHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC KVIVYEDRFYESFDSLINEENWSLIKAWMLTKIARGATSFFNEDLRILGGAYGRFLSNVQ EEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARSQEKHQLDLTESYFSQVIGLFYGKKYFGEAAKADVKRMVTAMIKVYQARLSKNEWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QETAEKAIEKLDAITPFIGFPDKLPEIYSRLKTTSGSLYEDALKFDEILTARTFEKFSED HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDKTSWHMPAHMVNAYYSPDSNTIVFPAAILQAPFYSLEQSSSQNYGGIGTVIAHEISHA HHHHCCCCCHHHHHHEECCCCCEEEEHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHH FDNNGAQFDKEGNLNKWWLDEDYEAFEEKQKEMIALFDGVETEAGPANGKLIVSENIADQ HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC GGITAALTAAKDEKDVDLKAFFSQWAKIWRMKASKEFQQMLLSMDVHAPAKLRANIPPTN CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC LEEFYETFDVKETDKMYRAPENRLKIW HHHHHHHCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TRIQDDLFATVNAEWLENAEIPADKPRISAFDELVLKNEKNLAKDLADLSQNLPTDNPE CCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH LLEAIKFYNKAGDWQTREKADFSAVKNELAKVETLNTFEDFKNNLTQLVFHSQAPLPFSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE SVEPDMKDAIHYSLGFSGPGLILPDTTYYNDEHPRKKELLDFWAKNTSEILKTFDVENAE CCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHH EIAKSALKFDALLVPSANTSEEWAKYAELYHPISTDSFVSKVKNLDLKSLIKDLVKTEPD HHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC KVIVYEDRFYESFDSLINEENWSLIKAWMLTKIARGATSFFNEDLRILGGAYGRFLSNVQ EEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARSQEKHQLDLTESYFSQVIGLFYGKKYFGEAAKADVKRMVTAMIKVYQARLSKNEWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QETAEKAIEKLDAITPFIGFPDKLPEIYSRLKTTSGSLYEDALKFDEILTARTFEKFSED HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDKTSWHMPAHMVNAYYSPDSNTIVFPAAILQAPFYSLEQSSSQNYGGIGTVIAHEISHA HHHHCCCCCHHHHHHEECCCCCEEEEHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHH FDNNGAQFDKEGNLNKWWLDEDYEAFEEKQKEMIALFDGVETEAGPANGKLIVSENIADQ HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC GGITAALTAAKDEKDVDLKAFFSQWAKIWRMKASKEFQQMLLSMDVHAPAKLRANIPPTN CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC LEEFYETFDVKETDKMYRAPENRLKIW HHHHHHHCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8244921; 11337471