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The map label for this gene is yqgA

Identifier: 15673600

GI number: 15673600

Start: 1661978

End: 1663690

Strand: Reverse

Name: yqgA

Synonym: L61727

Alternate gene names: NA

Gene position: 1663690-1661978 (Counterclockwise)

Preceding gene: 15673602

Following gene: 15673599

Centisome position: 70.33

GC content: 36.14

Gene sequence:

>1713_bases
ATGTCTAATATTAAAATCACTCCATTAGGTGGTGTGCGTGAATTTGGTAAGAACATGTATTTAGTTGAGGTTGAAGAGCA
AATTTTTGTGCTTGATGCAGGACTTAAATATGCTGAAATGGATCAACTTGGTGTTGACTTTGTTATTCCTGATATTACAT
ATCTTTTAGAAAATGCGGATCGTGTCGCAGGAATTTTCTTGACTCACGGACATGCTGATTCAATTGGTGCTTTGCCTTAT
ATCGTTTCTGAATTAAAAGTTCCTGTTTTTGGTTCAGAATTAACAATCGAACTTGCAAAAATTAATGTCAAAAATTATGC
TGACAGTCGCAAATTCAACGATTTTCATGTTGTAACTGAAGATACAGAAATTGATTTTGGTAAAGCCGTCATTTCATTCT
TCTCAACAACACATACAATTCCAGAAAGCTTAGGAATTGTGATTTCTACAAATGACGGAAACATTGTTTATACAGGTGAT
TTCCGTTTTGATCCAGCTGTTGCAAAAGGCTATCGTACCAATATGCGCCGATTGGCTGAAATTGGGAATAGTGGAGTCCT
TGCTTTACTTTCGTCATCACCAAACGCTTTGTCAACAATGCAATCTGCTAGCGAGCATGAAATTTATGAAAAAATTTATG
ACTATATTGATGACAACGAAGGACGGGTCATTATTGCTTGTAACGCGGGTAATTTAGGACGTATTCAACAAACAATTGAT
GCTGCCATTAAACTTGGGCGTCGTGTTGCTTTTACAGGCGAAGATATGGATCAAATCATCGAAACAGCAACTCGTCTTAA
CAAATTACAAATTGTTGATAAAAAATCAATTATTAAACCAGCAGAAATTAAAAAATATGCTGATAATGAGTTAGTTATTT
TAGAAACAGGACGAATGGGTGAACCACTTAAATCTCTTGGAGACATGGCTCATCGTCGTCATAAATACGTTAAAATTAAA
GATGGAGATTTAGTACTTGCTGTTACAAGTCCATCTGTCTCTTATGAAACAACAATTGCTCGTATTGAAAATGAAATCTA
TAAAGCTGGCGGAGTCATGAAAATGTTGGCTTCAGATTTGAAAATATCTGGTCACGCGAATGCTCGTGATTTGCAATTCT
TACTTGATATCTTCCGTCCAAAAAATTTGATTCCAATCCAAGGGGAGTATCGTGAACTTAGTGCCCATGCTGATTTAGCA
ATGGAAATGGACATTTTACCAGAACATATCTTTATCGCTAAACGTGGCGAAACAGTCAGTTTGGAAAATGGAGACATGAT
CCCATCTGGTGTTATTCAAGCTGAAAATGTTATGATTGACGGTTCAGGAGTTGGAGATATCGGTTCAGTTGTTTTACGCG
ACCGTAAAGTGCTATCAGAAGATGGTATTTTCATTGCCGTTATCACAATTTCTAAGACTGAGCGTAAAATCGTCAGCAAA
TCTCGTGTTCACACTCGTGGTTTTGTTTATGTTAAAACTTCACGTGATCTGATGCGTGAAGCTGGTGAGTTGGTCAACGA
AACTGTTGATAAATATCTTTCTGGAAAAGAATTTGATTGGGCAGAAATCAAAGGTTCTATCCGTGATGCTCTTGGAAAAT
TTTTATACGAGCAAACAAAACGTAAACCAGTGATTCTTCCAGTAGTTATGGAAGCACGTCAACCTCAAGATTTAAATAAA
CGTTACACTAAAAAAAATCATAATAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAAACAGGACTGTAAATTTACTGACAGAATTTGTCAATAACTTACAGATTCTTTTTATATCGAAAAAATTATAAATTA
CACTGACAAGAAAGGTTTTT

Downstream 100 bases:

>100_bases
AAGTTACAAAGCCTCCATTTTTTCGTATAGAAAGTTAGGAGGTTTTTTATGTCTCAAAAATCAATAAAGAAAATAACGAT
GACTGTTGGAGTAGGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J2 [H]

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MSNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENADRVAGIFLTHGHADSIGALPY
IVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGD
FRFDPAVAKGYRTNMRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTID
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMGEPLKSLGDMAHRRHKYVKIK
DGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDLKISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLA
MEMDILPEHIFIAKRGETVSLENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTKRKPVILPVVMEARQPQDLNK
RYTKKNHNKK

Sequences:

>Translated_570_residues
MSNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENADRVAGIFLTHGHADSIGALPY
IVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGD
FRFDPAVAKGYRTNMRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTID
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMGEPLKSLGDMAHRRHKYVKIK
DGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDLKISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLA
MEMDILPEHIFIAKRGETVSLENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTKRKPVILPVVMEARQPQDLNK
RYTKKNHNKK
>Mature_569_residues
SNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENADRVAGIFLTHGHADSIGALPYI
VSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTEDTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDF
RFDPAVAKGYRTNMRRLAEIGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTIDA
AIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMGEPLKSLGDMAHRRHKYVKIKD
GDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDLKISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAM
EMDILPEHIFIAKRGETVSLENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSKS
RVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTKRKPVILPVVMEARQPQDLNKR
YTKKNHNKK

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 63526; Mature: 63395

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENAD
CCCEEEEECCCHHHHCCCEEEEEECCEEEEEECCCCCHHHHHCCCEEEHHHHHHHHCCCC
RVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTE
CEEEEEEECCCCCCCCHHHHHHHHCCCCEECCCEEEEEEEEEEHHCCCCCCCCCEEEEEC
DTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDFRFDPAVAKGYRTNMRRLAE
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCEECHHHHHHHHHHHHHHHH
IGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTID
CCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMG
HHHHHCCEEEECCCCHHHHHHHHHHHHHEEEECHHHCCCCHHHHHCCCCCEEEEECCCCC
EPLKSLGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDL
CHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHC
KISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFIAKRGETVS
EECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEECCCCCEEEEEECCCEEE
LENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
ECCCCCCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTK
CCCEECEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
RKPVILPVVMEARQPQDLNKRYTKKNHNKK
CCCEEEEEEECCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNIKITPLGGVREFGKNMYLVEVEEQIFVLDAGLKYAEMDQLGVDFVIPDITYLLENAD
CCEEEEECCCHHHHCCCEEEEEECCEEEEEECCCCCHHHHHCCCEEEHHHHHHHHCCCC
RVAGIFLTHGHADSIGALPYIVSELKVPVFGSELTIELAKINVKNYADSRKFNDFHVVTE
CEEEEEEECCCCCCCCHHHHHHHHCCCCEECCCEEEEEEEEEEHHCCCCCCCCCEEEEEC
DTEIDFGKAVISFFSTTHTIPESLGIVISTNDGNIVYTGDFRFDPAVAKGYRTNMRRLAE
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCEECHHHHHHHHHHHHHHHH
IGNSGVLALLSSSPNALSTMQSASEHEIYEKIYDYIDDNEGRVIIACNAGNLGRIQQTID
CCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
AAIKLGRRVAFTGEDMDQIIETATRLNKLQIVDKKSIIKPAEIKKYADNELVILETGRMG
HHHHHCCEEEECCCCHHHHHHHHHHHHHEEEECHHHCCCCHHHHHCCCCCEEEEECCCCC
EPLKSLGDMAHRRHKYVKIKDGDLVLAVTSPSVSYETTIARIENEIYKAGGVMKMLASDL
CHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHC
KISGHANARDLQFLLDIFRPKNLIPIQGEYRELSAHADLAMEMDILPEHIFIAKRGETVS
EECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEECCCCCEEEEEECCCEEE
LENGDMIPSGVIQAENVMIDGSGVGDIGSVVLRDRKVLSEDGIFIAVITISKTERKIVSK
ECCCCCCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH
SRVHTRGFVYVKTSRDLMREAGELVNETVDKYLSGKEFDWAEIKGSIRDALGKFLYEQTK
CCCEECEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
RKPVILPVVMEARQPQDLNKRYTKKNHNKK
CCCEEEEEEECCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA