| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yqcF
Identifier: 15673567
GI number: 15673567
Start: 1628791
End: 1629408
Strand: Direct
Name: yqcF
Synonym: L28525
Alternate gene names: NA
Gene position: 1628791-1629408 (Clockwise)
Preceding gene: 15673557
Following gene: 15673588
Centisome position: 68.85
GC content: 31.07
Gene sequence:
>618_bases ATGAGTTTTATAAATATTGTTATGTTGCCTGATTTCATCAGTGTTATTTCAGATGGACAAATTACAACCAACGAAGTTCT TACCCAAAGTCATTTTAAAAAATTTGAAAGTAATCCAAATGGGTTCGTTGTTGGAATTACCGGATTTGAATTGATTACCA ATAATATTCGCAAGAAATTTTATTATCAACCTAATTTAAATTTTGAGGAAGCTGAACTTTTGCTTAGGGCTGAACTTGAA AAATATAAAAGTAAGCAAGTTAATTTTGGTCAACATATTTCTTTTAATGCTGTCATTGCTGGTTTTCCTATTGAGAACCC CAAAGTCCCTAAAGCTTTAAGTTTTCATGTTGCAAATCAAAACATTTCTGAACGCTACTATGAAAAATCGGCAATTCTTT CTTTGATTCCCGATGATATTTCTTTTAACCCCAATCAAATTATTACTGATAATCTGAATAAATCTTTGAATATCACTCCC ACTTTTCAAGTTCAAACCCTTCAACGTAATGCACTCTATAAAGTTGCTGACCAATCCAAAACGGTCAATAAGGTTATTTT TCAAGAAATAATTGAACCTAAAATTACTGACAGAAGTCACTATTCTAGCTGTCAGTAA
Upstream 100 bases:
>100_bases AGTGATACAATGATAAGAAACATTTGAAAATCAACCACTTCTTCTGTCAGTAAAATTTACTAGATACTTTGCTGACAGAA ATTTTTAAGGATTTTATACC
Downstream 100 bases:
>100_bases AAAAAAGACTGAATTAATCAGTCTTTTTTTCATCGTTTTTCTTTGGATTAGCCTTTGATAAAGCCAATTTACCATGAGGA TTGTATTTCTTTAACAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSFINIVMLPDFISVISDGQITTNEVLTQSHFKKFESNPNGFVVGITGFELITNNIRKKFYYQPNLNFEEAELLLRAELE KYKSKQVNFGQHISFNAVIAGFPIENPKVPKALSFHVANQNISERYYEKSAILSLIPDDISFNPNQIITDNLNKSLNITP TFQVQTLQRNALYKVADQSKTVNKVIFQEIIEPKITDRSHYSSCQ
Sequences:
>Translated_205_residues MSFINIVMLPDFISVISDGQITTNEVLTQSHFKKFESNPNGFVVGITGFELITNNIRKKFYYQPNLNFEEAELLLRAELE KYKSKQVNFGQHISFNAVIAGFPIENPKVPKALSFHVANQNISERYYEKSAILSLIPDDISFNPNQIITDNLNKSLNITP TFQVQTLQRNALYKVADQSKTVNKVIFQEIIEPKITDRSHYSSCQ >Mature_204_residues SFINIVMLPDFISVISDGQITTNEVLTQSHFKKFESNPNGFVVGITGFELITNNIRKKFYYQPNLNFEEAELLLRAELEK YKSKQVNFGQHISFNAVIAGFPIENPKVPKALSFHVANQNISERYYEKSAILSLIPDDISFNPNQIITDNLNKSLNITPT FQVQTLQRNALYKVADQSKTVNKVIFQEIIEPKITDRSHYSSCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23439; Mature: 23308
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFINIVMLPDFISVISDGQITTNEVLTQSHFKKFESNPNGFVVGITGFELITNNIRKKF CCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHE YYQPNLNFEEAELLLRAELEKYKSKQVNFGQHISFNAVIAGFPIENPKVPKALSFHVANQ EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCC NISERYYEKSAILSLIPDDISFNPNQIITDNLNKSLNITPTFQVQTLQRNALYKVADQSK CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEECCEEEEEEECHHCHHHHHHCCCH TVNKVIFQEIIEPKITDRSHYSSCQ HHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SFINIVMLPDFISVISDGQITTNEVLTQSHFKKFESNPNGFVVGITGFELITNNIRKKF CEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHE YYQPNLNFEEAELLLRAELEKYKSKQVNFGQHISFNAVIAGFPIENPKVPKALSFHVANQ EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCC NISERYYEKSAILSLIPDDISFNPNQIITDNLNKSLNITPTFQVQTLQRNALYKVADQSK CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEECCEEEEEEECHHCHHHHHHCCCH TVNKVIFQEIIEPKITDRSHYSSCQ HHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA