| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yoaH
Identifier: 15673352
GI number: 15673352
Start: 1408993
End: 1409535
Strand: Direct
Name: yoaH
Synonym: L8702
Alternate gene names: NA
Gene position: 1408993-1409535 (Clockwise)
Preceding gene: 15673347
Following gene: 15673353
Centisome position: 59.56
GC content: 34.07
Gene sequence:
>543_bases ATGAATAAAAGCAGAATAGAGGCGCTTACTGACGGAATATTTGCCGTAGTAATGACCCTAACAGTTTTAGAATTTAAAGT TCCAGAAGATGGAAATCTTTTTTCACCAAATGTATTACTTATGCTCCTTATTTATATCACTACTTTTGTTGCCCTTGCTT CCATTTGGAACTCACTGCACCATGTAATGACTTTTATCAAATCAAATAAAATTGATGAGTTAATTCTCTGGTCTAATCAT TGGATTCTACTTATTGTTTGTCTCTTTCCCTTTTCAACTGTTGCACACGCAGAACATACGAACTCTTTGACTGCAAGTTT AGCCTATGTTTCAACCTATTTAATTCCTTGGATTAGTTTGATTGTTTTCAGTCAAATAATTTATAAACAATACAATGGGA GTGCTACTCTTCGAAAGAGAAATCTGGAAAGAATTAAAATCTTTCTAGTCTTTTTACTACCTGGAGACTCTGATATCACT TGTTTGGCTGTACGCTCTGCCAATAGTGACTATTTTAATGGCAATAAATTGGGGAAGACATAG
Upstream 100 bases:
>100_bases CTCGTGATTCAACTAACAACACTATATAAGATATCAATAAAAAGCTAATAAGCTCTTTCTATAACAGAGTTTATTAGCTT TTTTTGCTATAATTATAAGC
Downstream 100 bases:
>100_bases CAATTTTGATTAAGCGTCTAAACAACGCTTTTTTTATTACCGTTTTGCGATTTATAGATTTCTTGACTCCAAACAATTTA TTTCTGAAATATAAATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNKSRIEALTDGIFAVVMTLTVLEFKVPEDGNLFSPNVLLMLLIYITTFVALASIWNSLHHVMTFIKSNKIDELILWSNH WILLIVCLFPFSTVAHAEHTNSLTASLAYVSTYLIPWISLIVFSQIIYKQYNGSATLRKRNLERIKIFLVFLLPGDSDIT CLAVRSANSDYFNGNKLGKT
Sequences:
>Translated_180_residues MNKSRIEALTDGIFAVVMTLTVLEFKVPEDGNLFSPNVLLMLLIYITTFVALASIWNSLHHVMTFIKSNKIDELILWSNH WILLIVCLFPFSTVAHAEHTNSLTASLAYVSTYLIPWISLIVFSQIIYKQYNGSATLRKRNLERIKIFLVFLLPGDSDIT CLAVRSANSDYFNGNKLGKT >Mature_180_residues MNKSRIEALTDGIFAVVMTLTVLEFKVPEDGNLFSPNVLLMLLIYITTFVALASIWNSLHHVMTFIKSNKIDELILWSNH WILLIVCLFPFSTVAHAEHTNSLTASLAYVSTYLIPWISLIVFSQIIYKQYNGSATLRKRNLERIKIFLVFLLPGDSDIT CLAVRSANSDYFNGNKLGKT
Specific function: Unknown
COG id: COG3548
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20388; Mature: 20388
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSRIEALTDGIFAVVMTLTVLEFKVPEDGNLFSPNVLLMLLIYITTFVALASIWNSLH CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH HVMTFIKSNKIDELILWSNHWILLIVCLFPFSTVAHAEHTNSLTASLAYVSTYLIPWISL HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH IVFSQIIYKQYNGSATLRKRNLERIKIFLVFLLPGDSDITCLAVRSANSDYFNGNKLGKT HHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNKSRIEALTDGIFAVVMTLTVLEFKVPEDGNLFSPNVLLMLLIYITTFVALASIWNSLH CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH HVMTFIKSNKIDELILWSNHWILLIVCLFPFSTVAHAEHTNSLTASLAYVSTYLIPWISL HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH IVFSQIIYKQYNGSATLRKRNLERIKIFLVFLLPGDSDITCLAVRSANSDYFNGNKLGKT HHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA