| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is acmC
Identifier: 15673347
GI number: 15673347
Start: 1402449
End: 1403078
Strand: Direct
Name: acmC
Synonym: L2183
Alternate gene names: 15673347
Gene position: 1402449-1403078 (Clockwise)
Preceding gene: 15673341
Following gene: 15673352
Centisome position: 59.29
GC content: 34.92
Gene sequence:
>630_bases ATGAAATATAAAACTCGACGAAGAAAACCAAATCGACGTCAATCCTTGTTAAAACAGCTCATCTTTATTTTCCTAGTTAT TTTAGGAATCTTAGTCTATAATAAAATTTTTAATAACCAAGCACAAAAGCCGTCTGAAGCACAACTTCAAGAAATTAATG AACATAAATTCATCAAAGAAATTGCTCCACTCGCTCAAAAATCACAAAAAGAAAGTCAAGTACTAGCTTCTATCACCATT GCTCAGGCCTGTCTTGAGTCTAATTTTGGCAAAAGCGAACTTGCAAGTAAATATCATAACCTTTTTGGTGTCAAAGCATC TGATGATGTGCCAAAGGTTTCGCTTGCTACGCAAGAATATGAAAATGGTCAGTGGGTCACTGTCCAAGGTGTTTTCCGTG TTTATCCAAATTTTGCTGATTCAGTTTCGGCACACACCCAGCTTTTCCTTTACGGAACAACATGGAATTCTAAACAATAT GCTTCAGTTCTTAGTGCAACTGATTATAAAACTGCTGCTAAAGCCGTTCAAAATTCTGGCTATGCAACAGACCCCACTTA TGCTGACAAACTTATCAATATGATTGAAACTTATCATTTAAATCAATATGATAAAAGTTCAAGTATTTAA
Upstream 100 bases:
>100_bases TTTACTGACAGAAATTTTATCGCTTACTTCTTAACTAATTTTAGTATAACAAATATTGATTTTTAAGCCAAGAACTTGAA TTTTATGTTAAACTATTTTT
Downstream 100 bases:
>100_bases AAATCACTGACAGATTTTTGTCAGTGACTTTTTTTAAAATTTTAATGTTTTTCAAAAACGCCTTTAATTGACTTGAGAAT TTCCATACAGATTACAGCAA
Product: N-acetylmuramidase
Products: NA
Alternate protein names: Autolysin lytG; Exo-beta-N-acetylglucosaminidase lytG; Peptidoglycan hydrolase lytG [H]
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKYKTRRRKPNRRQSLLKQLIFIFLVILGILVYNKIFNNQAQKPSEAQLQEINEHKFIKEIAPLAQKSQKESQVLASITI AQACLESNFGKSELASKYHNLFGVKASDDVPKVSLATQEYENGQWVTVQGVFRVYPNFADSVSAHTQLFLYGTTWNSKQY ASVLSATDYKTAAKAVQNSGYATDPTYADKLINMIETYHLNQYDKSSSI
Sequences:
>Translated_209_residues MKYKTRRRKPNRRQSLLKQLIFIFLVILGILVYNKIFNNQAQKPSEAQLQEINEHKFIKEIAPLAQKSQKESQVLASITI AQACLESNFGKSELASKYHNLFGVKASDDVPKVSLATQEYENGQWVTVQGVFRVYPNFADSVSAHTQLFLYGTTWNSKQY ASVLSATDYKTAAKAVQNSGYATDPTYADKLINMIETYHLNQYDKSSSI >Mature_209_residues MKYKTRRRKPNRRQSLLKQLIFIFLVILGILVYNKIFNNQAQKPSEAQLQEINEHKFIKEIAPLAQKSQKESQVLASITI AQACLESNFGKSELASKYHNLFGVKASDDVPKVSLATQEYENGQWVTVQGVFRVYPNFADSVSAHTQLFLYGTTWNSKQY ASVLSATDYKTAAKAVQNSGYATDPTYADKLINMIETYHLNQYDKSSSI
Specific function: Is the major glucosaminidase responsible for peptidoglycan structural determination during vegetative growth. Acts processively from the ends of the glycan strands. Also plays a role in motility, chemotaxis and cell division [H]
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 73 family [H]
Homologues:
Organism=Escherichia coli, GI1787321, Length=146, Percent_Identity=38.3561643835616, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000423 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 23715; Mature: 23715
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKTRRRKPNRRQSLLKQLIFIFLVILGILVYNKIFNNQAQKPSEAQLQEINEHKFIKE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IAPLAQKSQKESQVLASITIAQACLESNFGKSELASKYHNLFGVKASDDVPKVSLATQEY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHC ENGQWVTVQGVFRVYPNFADSVSAHTQLFLYGTTWNSKQYASVLSATDYKTAAKAVQNSG CCCCEEEEEHHHHHCCCHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC YATDPTYADKLINMIETYHLNQYDKSSSI CCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKYKTRRRKPNRRQSLLKQLIFIFLVILGILVYNKIFNNQAQKPSEAQLQEINEHKFIKE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IAPLAQKSQKESQVLASITIAQACLESNFGKSELASKYHNLFGVKASDDVPKVSLATQEY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHC ENGQWVTVQGVFRVYPNFADSVSAHTQLFLYGTTWNSKQYASVLSATDYKTAAKAVQNSG CCCCEEEEEHHHHHCCCHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC YATDPTYADKLINMIETYHLNQYDKSSSI CCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]