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The map label for this gene is rmaF

Identifier: 15673287

GI number: 15673287

Start: 1340403

End: 1340873

Strand: Direct

Name: rmaF

Synonym: L140141

Alternate gene names: 15673287

Gene position: 1340403-1340873 (Clockwise)

Preceding gene: 15673285

Following gene: 15673288

Centisome position: 56.66

GC content: 32.48

Gene sequence:

>471_bases
ATGACTAAAGAAAACTCAGGAATAGACGATAACTTAAATTTTACTAGAGATTTGGCTTTATTTTACTTCGGATACCGTGC
ATTTATTAAACAAGAGGACGACCTAGTACTTTCTTACGGAATTCGTCAAGTACATCGGCGAATTATATTTTTCATTGGAA
GACTTCCTGGCTTAACTGTTAATGAATTACTTGAAGTGCTTGATATTTCTAAACAAGCTTTGAACGGTCCTATGAATGAT
TTGAAAGAAAAAGAATTGGTTCATTTCAAGCCAAATGAAAATGACAAAAGAATCAAACAGCTTTATCTGACCGAACAAGG
AAACATGTTAGATGAACGTATGAATGAAAATCAAATCAATAAAATGAAGCAATATTTTAGTGAATCCGGCGATAAAGAGG
GCAGTTTTTGGACTAAGGTCATGGAATTATATGCCAATGAAATTGGTGAAAAATATGTCAATCGTTTATAA

Upstream 100 bases:

>100_bases
TCAACTTGACATTTGTAGAATAACGCTTTTCTTTAAATAAGTCAACGATATTGACTTATTTAAATTATCAAGTATAATAG
ACTAATAAAAGGAGTGAGCT

Downstream 100 bases:

>100_bases
GGTCTTAATAAGACTACTATCAATTACAAGTGAAAGTTAAATAGATATCAATGAATACACATCAACTTGAAATTTTTTAT
CATGTCGCAAAATTTCAGTC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTKENSGIDDNLNFTRDLALFYFGYRAFIKQEDDLVLSYGIRQVHRRIIFFIGRLPGLTVNELLEVLDISKQALNGPMND
LKEKELVHFKPNENDKRIKQLYLTEQGNMLDERMNENQINKMKQYFSESGDKEGSFWTKVMELYANEIGEKYVNRL

Sequences:

>Translated_156_residues
MTKENSGIDDNLNFTRDLALFYFGYRAFIKQEDDLVLSYGIRQVHRRIIFFIGRLPGLTVNELLEVLDISKQALNGPMND
LKEKELVHFKPNENDKRIKQLYLTEQGNMLDERMNENQINKMKQYFSESGDKEGSFWTKVMELYANEIGEKYVNRL
>Mature_155_residues
TKENSGIDDNLNFTRDLALFYFGYRAFIKQEDDLVLSYGIRQVHRRIIFFIGRLPGLTVNELLEVLDISKQALNGPMNDL
KEKELVHFKPNENDKRIKQLYLTEQGNMLDERMNENQINKMKQYFSESGDKEGSFWTKVMELYANEIGEKYVNRL

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18423; Mature: 18292

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKENSGIDDNLNFTRDLALFYFGYRAFIKQEDDLVLSYGIRQVHRRIIFFIGRLPGLTV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
NELLEVLDISKQALNGPMNDLKEKELVHFKPNENDKRIKQLYLTEQGNMLDERMNENQIN
HHHHHHHHHHHHHHCCCHHHHHHHCEEEECCCCCHHHHHHHHHCCCCCHHHHHCCHHHHH
KMKQYFSESGDKEGSFWTKVMELYANEIGEKYVNRL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKENSGIDDNLNFTRDLALFYFGYRAFIKQEDDLVLSYGIRQVHRRIIFFIGRLPGLTV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
NELLEVLDISKQALNGPMNDLKEKELVHFKPNENDKRIKQLYLTEQGNMLDERMNENQIN
HHHHHHHHHHHHHHCCCHHHHHHHCEEEECCCCCHHHHHHHHHCCCCCHHHHHCCHHHHH
KMKQYFSESGDKEGSFWTKVMELYANEIGEKYVNRL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]