| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yljJ
Identifier: 15673165
GI number: 15673165
Start: 1199039
End: 1200295
Strand: Direct
Name: yljJ
Synonym: L198787
Alternate gene names: 15673165
Gene position: 1199039-1200295 (Clockwise)
Preceding gene: 15673164
Following gene: 15673166
Centisome position: 50.69
GC content: 32.22
Gene sequence:
>1257_bases ATGTCTTATTCAGAAGATACAATTGATTTCTTACATCAGGGAGATCTGATTGGAATGCAAAATTCACTTGCTAAAGCATT AAAAAATGATAATAGTGAAATGTTGGCTGACCTAGCCGAATATATGCAAATGATGGGTTTCATTGATGAAAGTCAAAAAA TTTATGACCAAATCATGTCAGAAGATCCGGAAACAACTGATTACCTGATTAACTTAGCAGAAATTGCAGAAGATAACGGT AATTTGGATGAAGCATTAAATTACCTTTATCAAATTCCGGTGAATGATGAAAATTATATTGCTGCTTTAATCAAAATTGC TGACTTATATCAATTTGAAGGTGATTTTGAAACAGCAATTTCTAAGTTAGAAGAAGCAAGAGAATTATCGGATTCTCCTC TGATTACTTTTGCTTTGGCTGAGTCCTACTTTGAACAAGGTGATTATTCAGCTGCCATTACCGAATATGCAAAACTTTCA GAACGAAAAATTTTACATGAAACAAAAATTTCTATTTATCAAAGAATTGGTGACTCTTATGCCCAATTAGGTAATTTTGA GAATGCCATATCATTTCTTGAAAAATCACTTGAATTTGATGAAAAACCGGAAACCTTGTATAAAATTGCTCTTCTTTATG GAGAAACTCATAATGAAACAAGAGCCATTGCTAATTTCAAACGGTTAGAAAAAATGGATGTTGAATTTTTGAACTATGAA TTAGCCTATGCCCAAACCCTAGAAGCTAATCAAGAATTTAAAGCTGCACTAGAAATGGCAAAGAAAGGGATGAAAAAAAA TCCTAATGCCGTTCCTCTCTTACACTTCGCTTCAAAAATTTGTTTCAAACTTAAGGACAAAGCTGCAGCAGAACGTTATC TCGTGGATGCTTTAAATTTACCAGAATTACATGACGAAACAGTCTTTTTGCTTGCTAATTTATACTTCAACGAAGAAGAT TTTGAAGCTGTCATTAATCTTGAAGAGCTTTTAGAAGATGAACATTTATTAGCTAAATGGCTTTTTGCAGGAGCACATAA AGCTTTGGAAAATGATTCTGAAGCGGCTGCTTTGTATGAAGAACTCATTCAAACCAATCTGTCAGAGAATCCAGAGTTTT TAGAAGACTATATTGATTTTCTTAAAGAAATTGGTCAAATTTCTAAAACAGAACCAATTATTGAACAATATTTGGAACTT GTTCCAGATGATGAAAATATGAGAAATTTACTGACAGACTTAAAAAATAATTACTGA
Upstream 100 bases:
>100_bases TGTTTACGAATGGTATCGTGAAATTTCAGTTCTTTATCGTGAAGAAACGGCTACAGAAGAAGCAAATGAGTAATTAATAG AATAAAAAATAAGGAGAAAA
Downstream 100 bases:
>100_bases CAAAGCTGTCAGTAATTATTTTTATTGTAAGCTAGAAAATTCAAAAACTTGCGTCAAAATAATTGTAAAAGGTTCTATTA TCTGATAAAATGATTGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNG NLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLS ERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYE LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNEED FEAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLEL VPDDENMRNLLTDLKNNY
Sequences:
>Translated_418_residues MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNG NLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLS ERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYE LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNEED FEAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLEL VPDDENMRNLLTDLKNNY >Mature_417_residues SYSEDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMSEDPETTDYLINLAEIAEDNGN LDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSE RKILHETKISIYQRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYEL AYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNLPELHDETVFLLANLYFNEEDF EAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELV PDDENMRNLLTDLKNNY
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 9 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 48028; Mature: 47897
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMS CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAI CCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSY HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYE HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PELHDETVFLLANLYFNEEDFEAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYE CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SYSEDTIDFLHQGDLIGMQNSLAKALKNDNSEMLADLAEYMQMMGFIDESQKIYDQIMS CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDPETTDYLINLAEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAI CCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSY HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMDVEFLNYE HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAAAERYLVDALNL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PELHDETVFLLANLYFNEEDFEAVINLEELLEDEHLLAKWLFAGAHKALENDSEAAALYE CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]