Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is yljF

Identifier: 15673161

GI number: 15673161

Start: 1195544

End: 1197151

Strand: Direct

Name: yljF

Synonym: L195271

Alternate gene names: NA

Gene position: 1195544-1197151 (Clockwise)

Preceding gene: 15673160

Following gene: 15673162

Centisome position: 50.54

GC content: 38.0

Gene sequence:

>1608_bases
ATGATTCGCATAACACAAATCAAAATTTCAATTGATGAACCTGTCAGTAAGGTTAAAAGTCTTGTTTTGAAAAAACTAAG
ACTACAAGAATCTGACTTACTGGATTATCGAATTTACAAAGAATCAATTGATGCAAGACATAGAGGCGAAATTGATTTTA
TCTATACTGTTGATATTAAACTTAAAGATGAAGCAAGAATTCTGTCTAAAAAAATAAAAAATGTTTCTTTGGCACCTGAA
TTAGATTATGTCAATCCAGTTATAGGAAGTAAAAAAATGCTTCATCGGCCTGTAGTCATTGGATTTGGTCCCGCAGGAAT
GTTTGCGGCTTTATTATTGGCTCAAAATGGTTATCGTCCAATTGTTCTTGAAAGAGGCCAAGCTGTTGATGAGCGTGTAA
AATCAATTGATAAGTTTTGGCTTGAAGGAAAACTTAATCCAAAATCGAATGTTCAATTTGGTGAAGGTGGAGCAGGAACT
TTTTCTGACGGTAAATTAACGAGTCGTGTTCGTGATTTGCGTGGTCGTAAGGTTTTGGAGGAATTTGTACAAGCTGGTGC
CCCAGAAGATATTCTTTATAAGGCACATCCTCATGTCGGAACTGATTTACTTCGTGACATTGTTAAAAATATCCGAAAGC
AAATTATTGAGTTGGGCGGAGAAGTTCATTTTGATGCTCAAGTTGAAGAGTTTTTAATTGAAGATGAAGAATTACAGGCT
GTAAAACTTGCTGACGGAAATATTATTAAAACAAATCAGGCTATTTTAGCCATTGGTCATTCGGCACGTGATACTTTCTC
AGAACTTTATGATAAAGGGGTAACGATTACAGCTAAACCCTTTGCTGTTGGAGTCAGAATTGAACATCCCCAATCTTTAA
TCAATAAAGCACAATATAAAGAATTTGCTGACCATCCGCGTCTTGGAGCAGCAGAATATCGCTTAACTTATAAGGCATCA
TCAGGGCGTGGCGTTTATACTTTCTGTATGTGTCCAGGAGGATTGGTTGTCCCAGCTGCATCAGAAGAAGGTGGCCTTGT
GACTAATGGGATGTCTGAACATGCTAGAGACCAAAAAAATGCAAATTCTGGACTTTTAGTCCAAGTTTTTCCAGAAGATT
TCCCAACTGACCATCCACTTGCTGGAGTAGAGTTCCAAAAGGAATTAGAACATAAAGCCTTTGAATTAGGTGGTTCTAAT
TATCAAGCACCAGCTCAACTTGTTGGAGACTTTCTTGATGGAAAAGCCTCTAAAGCAATGGGAACAGTTGAACCTAGTTA
TGCTTTAGGAGTGAAACCAACTAATCTTGAATCGCTATTCCCAGACTATGTTACACAATCTATGCGTGAAGCAATTGTTG
GATTAGATAAAAAAATGCATGGCTTTGCCCTTTCTGATGCTGTAATGACAGGGGTTGAATCTCGTTCATCTTCACCGGTC
AGAATTAATCGTGATGAAGAAAATTATCAATCTGTTTCGACAAAAGGAATCTATCCTTCAGGTGAAGGGGCTGGTTTTGC
TGGCGGAATTGTCTCAGCCGGTATTGACGGTTTAAAATGTGCTGAGAGCATGATTGCAGAATTCGCTAAACTTTTGATGG
AGGACTAA

Upstream 100 bases:

>100_bases
ACCAGTTGATTTATTCCCACAAACGCATCATATTGAATTAGTTGCTAGTTTTAATAAAAAATAAAAGAGGATAATAAATC
CTATTCATAGAAAGAAAATC

Downstream 100 bases:

>100_bases
AATGGCTCAAAAGACTCATGATTACGAAAGAGAATCTGAAGACTTTTATGACCATATTGCGAGTCGTTTTGATCATAGTT
TTGATGGATTTTTAGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MIRITQIKISIDEPVSKVKSLVLKKLRLQESDLLDYRIYKESIDARHRGEIDFIYTVDIKLKDEARILSKKIKNVSLAPE
LDYVNPVIGSKKMLHRPVVIGFGPAGMFAALLLAQNGYRPIVLERGQAVDERVKSIDKFWLEGKLNPKSNVQFGEGGAGT
FSDGKLTSRVRDLRGRKVLEEFVQAGAPEDILYKAHPHVGTDLLRDIVKNIRKQIIELGGEVHFDAQVEEFLIEDEELQA
VKLADGNIIKTNQAILAIGHSARDTFSELYDKGVTITAKPFAVGVRIEHPQSLINKAQYKEFADHPRLGAAEYRLTYKAS
SGRGVYTFCMCPGGLVVPAASEEGGLVTNGMSEHARDQKNANSGLLVQVFPEDFPTDHPLAGVEFQKELEHKAFELGGSN
YQAPAQLVGDFLDGKASKAMGTVEPSYALGVKPTNLESLFPDYVTQSMREAIVGLDKKMHGFALSDAVMTGVESRSSSPV
RINRDEENYQSVSTKGIYPSGEGAGFAGGIVSAGIDGLKCAESMIAEFAKLLMED

Sequences:

>Translated_535_residues
MIRITQIKISIDEPVSKVKSLVLKKLRLQESDLLDYRIYKESIDARHRGEIDFIYTVDIKLKDEARILSKKIKNVSLAPE
LDYVNPVIGSKKMLHRPVVIGFGPAGMFAALLLAQNGYRPIVLERGQAVDERVKSIDKFWLEGKLNPKSNVQFGEGGAGT
FSDGKLTSRVRDLRGRKVLEEFVQAGAPEDILYKAHPHVGTDLLRDIVKNIRKQIIELGGEVHFDAQVEEFLIEDEELQA
VKLADGNIIKTNQAILAIGHSARDTFSELYDKGVTITAKPFAVGVRIEHPQSLINKAQYKEFADHPRLGAAEYRLTYKAS
SGRGVYTFCMCPGGLVVPAASEEGGLVTNGMSEHARDQKNANSGLLVQVFPEDFPTDHPLAGVEFQKELEHKAFELGGSN
YQAPAQLVGDFLDGKASKAMGTVEPSYALGVKPTNLESLFPDYVTQSMREAIVGLDKKMHGFALSDAVMTGVESRSSSPV
RINRDEENYQSVSTKGIYPSGEGAGFAGGIVSAGIDGLKCAESMIAEFAKLLMED
>Mature_535_residues
MIRITQIKISIDEPVSKVKSLVLKKLRLQESDLLDYRIYKESIDARHRGEIDFIYTVDIKLKDEARILSKKIKNVSLAPE
LDYVNPVIGSKKMLHRPVVIGFGPAGMFAALLLAQNGYRPIVLERGQAVDERVKSIDKFWLEGKLNPKSNVQFGEGGAGT
FSDGKLTSRVRDLRGRKVLEEFVQAGAPEDILYKAHPHVGTDLLRDIVKNIRKQIIELGGEVHFDAQVEEFLIEDEELQA
VKLADGNIIKTNQAILAIGHSARDTFSELYDKGVTITAKPFAVGVRIEHPQSLINKAQYKEFADHPRLGAAEYRLTYKAS
SGRGVYTFCMCPGGLVVPAASEEGGLVTNGMSEHARDQKNANSGLLVQVFPEDFPTDHPLAGVEFQKELEHKAFELGGSN
YQAPAQLVGDFLDGKASKAMGTVEPSYALGVKPTNLESLFPDYVTQSMREAIVGLDKKMHGFALSDAVMTGVESRSSSPV
RINRDEENYQSVSTKGIYPSGEGAGFAGGIVSAGIDGLKCAESMIAEFAKLLMED

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 58671; Mature: 58671

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRITQIKISIDEPVSKVKSLVLKKLRLQESDLLDYRIYKESIDARHRGEIDFIYTVDIK
CEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEE
LKDEARILSKKIKNVSLAPELDYVNPVIGSKKMLHRPVVIGFGPAGMFAALLLAQNGYRP
ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEEEECHHHHHHHHHHHCCCCCE
IVLERGQAVDERVKSIDKFWLEGKLNPKSNVQFGEGGAGTFSDGKLTSRVRDLRGRKVLE
EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EFVQAGAPEDILYKAHPHVGTDLLRDIVKNIRKQIIELGGEVHFDAQVEEFLIEDEELQA
HHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCE
VKLADGNIIKTNQAILAIGHSARDTFSELYDKGVTITAKPFAVGVRIEHPQSLINKAQYK
EEECCCCEEECCCEEEEECCCHHHHHHHHHHCCCEEEECCEEEEEEECCHHHHHHHHHHH
EFADHPRLGAAEYRLTYKASSGRGVYTFCMCPGGLVVPAASEEGGLVTNGMSEHARDQKN
HHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCEEECCHHHHHHHHCC
ANSGLLVQVFPEDFPTDHPLAGVEFQKELEHKAFELGGSNYQAPAQLVGDFLDGKASKAM
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHCC
GTVEPSYALGVKPTNLESLFPDYVTQSMREAIVGLDKKMHGFALSDAVMTGVESRSSSPV
CCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHCCCHHCCEEHHHHHHHHHHCCCCCCE
RINRDEENYQSVSTKGIYPSGEGAGFAGGIVSAGIDGLKCAESMIAEFAKLLMED
EECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRITQIKISIDEPVSKVKSLVLKKLRLQESDLLDYRIYKESIDARHRGEIDFIYTVDIK
CEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEE
LKDEARILSKKIKNVSLAPELDYVNPVIGSKKMLHRPVVIGFGPAGMFAALLLAQNGYRP
ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEEEEECHHHHHHHHHHHCCCCCE
IVLERGQAVDERVKSIDKFWLEGKLNPKSNVQFGEGGAGTFSDGKLTSRVRDLRGRKVLE
EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EFVQAGAPEDILYKAHPHVGTDLLRDIVKNIRKQIIELGGEVHFDAQVEEFLIEDEELQA
HHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCE
VKLADGNIIKTNQAILAIGHSARDTFSELYDKGVTITAKPFAVGVRIEHPQSLINKAQYK
EEECCCCEEECCCEEEEECCCHHHHHHHHHHCCCEEEECCEEEEEEECCHHHHHHHHHHH
EFADHPRLGAAEYRLTYKASSGRGVYTFCMCPGGLVVPAASEEGGLVTNGMSEHARDQKN
HHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCEEECCHHHHHHHHCC
ANSGLLVQVFPEDFPTDHPLAGVEFQKELEHKAFELGGSNYQAPAQLVGDFLDGKASKAM
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHCC
GTVEPSYALGVKPTNLESLFPDYVTQSMREAIVGLDKKMHGFALSDAVMTGVESRSSSPV
CCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHCCCHHCCEEHHHHHHHHHHCCCCCCE
RINRDEENYQSVSTKGIYPSGEGAGFAGGIVSAGIDGLKCAESMIAEFAKLLMED
EECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]