Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is yliA

Identifier: 15673149

GI number: 15673149

Start: 1180044

End: 1180904

Strand: Direct

Name: yliA

Synonym: L179789

Alternate gene names: 15673149

Gene position: 1180044-1180904 (Clockwise)

Preceding gene: 15673148

Following gene: 15673150

Centisome position: 49.88

GC content: 34.49

Gene sequence:

>861_bases
ATGGGAAATAAAACTGGCAAGATATTTTCGATTCTTAGAGAGGCGAAGCACTTAACACTTAGAGAAGTGACGGCAAATGA
ATTCTCTTTGGCTCAGGAATCAAAGTTTGAACGTGGAGAAACCTCACTCACGATTGATAAATTTTTACTTTTGCTCCAAA
ATACTCAACTCTCGTTAGATGAATTTCAAGATTTTTATGATAGTTATTCCTTGTCTGAAGACTATACTTTTCATGATGAG
CTTCGAGAAGCCCATCGTATCAAAGACTTGAATCAAATCAAAAAATGGTTGCATTATTGGAAAGAGAAATCAGAAAAAAA
TTCGGATAAAAAATATTTCAAATTAAATTACATTGTATCTAAGGTATCACTCGCTTCTACTGCTGGTGGGAAGCCCACCA
AAGATGATATTGATGTTTTGATGAGTTATTTGGATTTAGTAGAACAGTGGGGGAGGTATGAAATTTGGGTGTTCAGTGTT
TGTCAGCATTATCTTGACGATAATATGTTGGATTATTATGGTACAGAAATATTTGATAAGTCAAGTTACTATAAAAATGT
TCACCAGAACCAACAAATGGTCATTCGGACAATGTTGAATCTTGCAGACACCTGGCTTAATCGAAAAAAATTAGAGAAGG
CATTGGTTTGTCTTAATCGTGTTAAGACAATCGAAATACCGATTGAGTTTTTTGAAGAAGCCATTACATTAAGATATTTG
GAAGGACATTATCTCCATCTATTGGAGGACCCAAAAGGGAAACTAATGATGCAAGATTGTGCTAAAGACATCGAAAAATA
TGGATATACTCAAGCAGCTCAGGAGCTTTATGAAGAGATTTACGATTTAGGAGAATTGTAA

Upstream 100 bases:

>100_bases
TCCATTTTTTTGTTCCATAATATCACTCTGAGCACATACCTCATACCTTACAGAGATTTTTGGTATAATTTGTTTGAATA
TATGAGAAAGCGAAAAAATA

Downstream 100 bases:

>100_bases
TGTTTTCATATATTTAAAAGTTTAAAAAATATTTAAGATAAAATGATAAAATCTCGATAACTTAGTTTAGTTATTGAGAT
TTTATTTTAGGAGTACTCAT

Product: positive transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDE
LREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSV
CQHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL
EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL

Sequences:

>Translated_286_residues
MGNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDE
LREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSV
CQHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL
EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL
>Mature_285_residues
GNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLDEFQDFYDSYSLSEDYTFHDEL
REAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVSKVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSVC
QHYLDDNMLDYYGTEIFDKSSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYLE
GHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33958; Mature: 33827

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNKTGKIFSILREAKHLTLREVTANEFSLAQESKFERGETSLTIDKFLLLLQNTQLSLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH
EFQDFYDSYSLSEDYTFHDELREAHRIKDLNQIKKWLHYWKEKSEKNSDKKYFKLNYIVS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KVSLASTAGGKPTKDDIDVLMSYLDLVEQWGRYEIWVFSVCQHYLDDNMLDYYGTEIFDK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCHHHHCC
SSYYKNVHQNQQMVIRTMLNLADTWLNRKKLEKALVCLNRVKTIEIPIEFFEEAITLRYL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHH
EGHYLHLLEDPKGKLMMQDCAKDIEKYGYTQAAQELYEEIYDLGEL
CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]