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The map label for this gene is ykdB

Identifier: 15672987

GI number: 15672987

Start: 1032978

End: 1033634

Strand: Direct

Name: ykdB

Synonym: L32731

Alternate gene names: 15672987

Gene position: 1032978-1033634 (Clockwise)

Preceding gene: 15672986

Following gene: 15672988

Centisome position: 43.67

GC content: 31.66

Gene sequence:

>657_bases
ATGAATAAAAAAATCTATTATATTTCGGGTGCTATTACCACCCTTGCCTTTTTAATTTTAGCGCTCTTTGTTAAAATTGA
TTTTACTCATGGTCCATTTCCTTTTGATCGACCAATTCAAACTTGGGCTTTTCATTTACAAAGCTCTTCAGGACTCACTT
ACTTTTTCTCTCATATGACAAATATTTTTGGAGATAAAGGTGGAATAATTGTCGCAGTTCTACTTGCTTTGGTTTTATAT
CTTCTCTTTAAACAGAAAGAAGCGACAATCTGGTTTGCGGCAACAGTTGTTTTAAGCCTTGCTTTAAATACTGTTATTAA
AGCAATTATTGGTCGAGAACGTCCTGATATTCATCGGTTAGCGGCTTTTGCAAATGAAGCTGGGAAAAGTTTTCCAAGCG
GACATTCCATTTTTGCAACAATTATTTTTGGAAGTATTTTCTTTATCTGTCTAGGAAAACTTAAAAATCGTTCTTCTAAA
ATTTTATTAGGCATTTTATGTATTATATTAATTGCATTAATAATGTTTTCAAGAATTTTTGTAGGGGTACATTATCCAAG
TGATACAATCGGCGGATTTCTCGAAGGAATTAGTATTCTATTACTTACTTACCCCACATATATTAAGTATCAAGAAAAAT
CTAAAAAAACCAATTGA

Upstream 100 bases:

>100_bases
ATATGCACAATTGAATGATGCCAAAGTCTTTGTTTCAAATAATTCTCCGAAAGGGTCAACTTTTCATCTCCTAATGGAGT
CTATAGAAAACTAATTAATT

Downstream 100 bases:

>100_bases
TATCAATTGGTTTTTATTAACGTCGAAAATAAATTATACCAATTATCGTCTTTTTGAGTTTTATTAGAAGTTTTATACTT
GACAATGATAAATAAGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Type 2 Phosphatidic Acid Phosphatase; Phosphoesterase PA-Phosphatase ; PAP2 Superfamily Protein; PAP2 Family Protein; Type 2 Phosphatidic Acid Phosphatase Family Protein; Phosphatidic Acid Phosphatase; Phospholipid Phosphatase; PAP2 Family Membrane-Associated Phospholipid Phosphatase; Acid Phosphatase Family Protein; Phosphatidylglycerophosphatase B Homolog

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKKIYYISGAITTLAFLILALFVKIDFTHGPFPFDRPIQTWAFHLQSSSGLTYFFSHMTNIFGDKGGIIVAVLLALVLY
LLFKQKEATIWFAATVVLSLALNTVIKAIIGRERPDIHRLAAFANEAGKSFPSGHSIFATIIFGSIFFICLGKLKNRSSK
ILLGILCIILIALIMFSRIFVGVHYPSDTIGGFLEGISILLLTYPTYIKYQEKSKKTN

Sequences:

>Translated_218_residues
MNKKIYYISGAITTLAFLILALFVKIDFTHGPFPFDRPIQTWAFHLQSSSGLTYFFSHMTNIFGDKGGIIVAVLLALVLY
LLFKQKEATIWFAATVVLSLALNTVIKAIIGRERPDIHRLAAFANEAGKSFPSGHSIFATIIFGSIFFICLGKLKNRSSK
ILLGILCIILIALIMFSRIFVGVHYPSDTIGGFLEGISILLLTYPTYIKYQEKSKKTN
>Mature_218_residues
MNKKIYYISGAITTLAFLILALFVKIDFTHGPFPFDRPIQTWAFHLQSSSGLTYFFSHMTNIFGDKGGIIVAVLLALVLY
LLFKQKEATIWFAATVVLSLALNTVIKAIIGRERPDIHRLAAFANEAGKSFPSGHSIFATIIFGSIFFICLGKLKNRSSK
ILLGILCIILIALIMFSRIFVGVHYPSDTIGGFLEGISILLLTYPTYIKYQEKSKKTN

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787064, Length=141, Percent_Identity=32.6241134751773, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24292; Mature: 24292

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIYYISGAITTLAFLILALFVKIDFTHGPFPFDRPIQTWAFHLQSSSGLTYFFSHMT
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
NIFGDKGGIIVAVLLALVLYLLFKQKEATIWFAATVVLSLALNTVIKAIIGRERPDIHRL
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AAFANEAGKSFPSGHSIFATIIFGSIFFICLGKLKNRSSKILLGILCIILIALIMFSRIF
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VGVHYPSDTIGGFLEGISILLLTYPTYIKYQEKSKKTN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC
>Mature Secondary Structure
MNKKIYYISGAITTLAFLILALFVKIDFTHGPFPFDRPIQTWAFHLQSSSGLTYFFSHMT
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
NIFGDKGGIIVAVLLALVLYLLFKQKEATIWFAATVVLSLALNTVIKAIIGRERPDIHRL
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AAFANEAGKSFPSGHSIFATIIFGSIFFICLGKLKNRSSKILLGILCIILIALIMFSRIF
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VGVHYPSDTIGGFLEGISILLLTYPTYIKYQEKSKKTN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA