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The map label for this gene is yjjF

Identifier: 15672950

GI number: 15672950

Start: 995620

End: 996414

Strand: Direct

Name: yjjF

Synonym: L195318

Alternate gene names: 15672950

Gene position: 995620-996414 (Clockwise)

Preceding gene: 15672949

Following gene: 15672953

Centisome position: 42.09

GC content: 37.23

Gene sequence:

>795_bases
ATGATGAATCCGGCAGAAATTTTATCTGCGACCATTCACCACGGTCAGGAAAAAATTAAACGTCCATTTTTAGAAAAAGC
TGTGCTTGGTTTTATTGGCGGAGCAATGATTTCCTTTGGTTATTTACTTTATATTAGAGTAGTAGCTTCCGTTGCTGAGG
AATTAGGAAGTCTTGCGAGCTTAATCGGAGCAAGTGTCTTTCCAATTGGCTTAATTGTTATCTTATTGGGAGGTGGTGAG
TTAATCACTTCAAATATGACAGCTGTATCAACTTCATTATTTGCTAAAAAGGTAAGTTTGAGTGATTTGCTTAAAAATTG
GTTGATTATTACTTTGTTTAATGTGATTGGAGCAATTTTTGTCGCTTTCGTCTTTGGACATCTCGTAGGATTGACTGGTA
CAGGAGATTATAAGACGGAACTTTTGAGTTTGGCTCAAGCAAAGATTAATGCGAGTTGGTCACAAGAATTTCTATCAGGG
ATTGGTTGTAATTGGTTCGTTGGTTTAGCTATGTGGATGTGTTACGGAGCAAAGGATGCGGCAGGGAAAATATTGGCCGT
TTGGTTTCCAGTGATGGCTTTTGTTGCGATTGGTTTTCAACATAGTATTGCAAATGCTTTTGTTATTCCTGCAGCAATTT
TTGAAAATGGAGCGAGCTGGCTAGATTTTGCTCATAATTTCTTGTTTGTTTATCTTGGAAATCTCTTAGGTGGATCAATT
TTTGTTGCTGGTTTTTACAGTTTAGGGTATCGTAGACAGGCTAGAGAACAAGAAGGACTTAAAAATCAAGAATAA

Upstream 100 bases:

>100_bases
CGTATAAGCCTGATTTTACAGTATTTCTTAGCATTAATAAGAAATTTATGATAGAATGAATGAGTTATTTTATAAATACG
CTTTCAGGAGAAAAATTATC

Downstream 100 bases:

>100_bases
ATAAAAAAGTTACTGACAGAAAGTCAGTAACTATTTTTTTAACTGATGATAACGATTGTACCAAATCTCGACGTACTCTT
TAGAAAAAGGTCCTTTTTCA

Product: transporter

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMNPAEILSATIHHGQEKIKRPFLEKAVLGFIGGAMISFGYLLYIRVVASVAEELGSLASLIGASVFPIGLIVILLGGGE
LITSNMTAVSTSLFAKKVSLSDLLKNWLIITLFNVIGAIFVAFVFGHLVGLTGTGDYKTELLSLAQAKINASWSQEFLSG
IGCNWFVGLAMWMCYGAKDAAGKILAVWFPVMAFVAIGFQHSIANAFVIPAAIFENGASWLDFAHNFLFVYLGNLLGGSI
FVAGFYSLGYRRQAREQEGLKNQE

Sequences:

>Translated_264_residues
MMNPAEILSATIHHGQEKIKRPFLEKAVLGFIGGAMISFGYLLYIRVVASVAEELGSLASLIGASVFPIGLIVILLGGGE
LITSNMTAVSTSLFAKKVSLSDLLKNWLIITLFNVIGAIFVAFVFGHLVGLTGTGDYKTELLSLAQAKINASWSQEFLSG
IGCNWFVGLAMWMCYGAKDAAGKILAVWFPVMAFVAIGFQHSIANAFVIPAAIFENGASWLDFAHNFLFVYLGNLLGGSI
FVAGFYSLGYRRQAREQEGLKNQE
>Mature_264_residues
MMNPAEILSATIHHGQEKIKRPFLEKAVLGFIGGAMISFGYLLYIRVVASVAEELGSLASLIGASVFPIGLIVILLGGGE
LITSNMTAVSTSLFAKKVSLSDLLKNWLIITLFNVIGAIFVAFVFGHLVGLTGTGDYKTELLSLAQAKINASWSQEFLSG
IGCNWFVGLAMWMCYGAKDAAGKILAVWFPVMAFVAIGFQHSIANAFVIPAAIFENGASWLDFAHNFLFVYLGNLLGGSI
FVAGFYSLGYRRQAREQEGLKNQE

Specific function: Involved In The Bidirectional Transport Of Formate. [C]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=275, Percent_Identity=28.3636363636364, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788837, Length=259, Percent_Identity=30.5019305019305, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI87082249, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321779, Length=178, Percent_Identity=32.0224719101124, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 28488; Mature: 28488

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS01005 FORMATE_NITRITE_TP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]