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The map label for this gene is yhfD

Identifier: 15672730

GI number: 15672730

Start: 755402

End: 756175

Strand: Direct

Name: yhfD

Synonym: L155396

Alternate gene names: 15672730

Gene position: 755402-756175 (Clockwise)

Preceding gene: 15672729

Following gene: 15672731

Centisome position: 31.93

GC content: 35.92

Gene sequence:

>774_bases
ATGATGAAAGCCGATTGGGATATGACGCCTGTTAAAGGTGGCTCTGGCAATGCATTTTTTGGGAAAAGTGATCAGGAACG
CGTTTTTATTAAAAAAAACGGCAGTCCATTTTTGCCGAGTATTTATCTTGAGGGAATCACGCCAAAAGTCTTATGGACAA
AACGTACGGCTGAAGGCGATACCTTATCTGCTCAACCTTGGATTGACGGTCATACACTAAGTCCTGAGGATATGGAAGAC
CGCCAAATTAATCATATTTTAGCACATTTGCATGACTCAAAAAAATTGGTTGAATCTTATAAGAAGTTGGGAAGTCAAAT
TATTCTTCCTGAACAATTATTAGAGGATTGTGTCCAAAATACTGAGGCTTTACGAACAAATCATTTTTTGTCAGGAATCA
TTGAAGAAATGCGTCAACAAGTTCCCGAAATCAAAAATGAAGAGGTCGTAGTCGTTCATGGCGATGTCAATCATAAAAAT
TGGTTAGTGGATGATAATTCAGGAAAAATTTATTTAGTAGATTGGGATACCGTCTTTTTATCAGATTCAATGGTTGATAT
GGCACATGTTTTATCACATTATATTAAACCAAATAACTGGTCTTTGTGGTTGATGACATCTGGTGTTAGACCTCGTTCAG
ATATTATGGATAAAGTGGCTTGGTATGGAAAACTTTCTTTTCTTCGCCAAATCTCTGAATATCTTTCTAGAGGAAAAATG
AAAGAAGTGAATCAAGAAATCTTGGGACTTCGTAAATTTTGTGAATTATTTTAG

Upstream 100 bases:

>100_bases
AAACTATTTTAATTCACTATCCAAACGCATAAGTTTGAGGAATAAAGTAAATGGTTCAAATAATGATTAATAGATTTTTA
AAGGAAAGGAGGAGATAAGG

Downstream 100 bases:

>100_bases
TAAAAATAGGCTAGGGTTTGGACCTTCCTATTTTTTGGCTTATAATTGAATAATAAAAATAAAGAAATAGAAGATCACTT
TTGCTGATTTTCTATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIILPEQLLEDCVQNTEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF

Sequences:

>Translated_257_residues
MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIILPEQLLEDCVQNTEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF
>Mature_257_residues
MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIILPEQLLEDCVQNTEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 29577; Mature: 29577

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEECCCCC
TLSAQPWIDGHTLSPEDMEDRQINHILAHLHDSKKLVESYKKLGSQIILPEQLLEDCVQN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHH
TEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKNWLVDDNSGKIYLVDWDTVFL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEE
SDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDKVAWYGKLSFLRQISEYLSRGKM
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KEVNQEILGLRKFCELF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEECCCCC
TLSAQPWIDGHTLSPEDMEDRQINHILAHLHDSKKLVESYKKLGSQIILPEQLLEDCVQN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHH
TEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKNWLVDDNSGKIYLVDWDTVFL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEE
SDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDKVAWYGKLSFLRQISEYLSRGKM
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KEVNQEILGLRKFCELF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]