| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ybhE
Identifier: 15672155
GI number: 15672155
Start: 176338
End: 177432
Strand: Direct
Name: ybhE
Synonym: L176316
Alternate gene names: NA
Gene position: 176338-177432 (Clockwise)
Preceding gene: 15672154
Following gene: 15672156
Centisome position: 7.45
GC content: 39.27
Gene sequence:
>1095_bases ATGGGAAAATTAGGGGTATCTATCTATCCAGAACGCTCAAATTTTGAGGCAGATAAAGCTTATCTTGATTTAGCGCATCA ATATGGATTTAAGCGTGTCTTCACTTCTTTACTCGAAATTGATGGAGATAAAGAAGGGGTTCTTGCAGCTTTCAAAAAAG TTGTTGATTACGCCAATCAGTTAGGAATGGAAGTCATGGTGGATATCAATCCAGGTCTCTTTACACAACTTAACATTAGT TATGATGACCTCAGCTTTTTCCATGAAATGGGTGCAGATGGAGTTCGACTTGACATAGGATTCACAGGAGCCGAAGAAGC CAGAATGACCCGAAATCCTTACGGAATCAAAATTGAAATCAACATGAGTCAGGGAACAACCTATGTTGATTCAATAATGG ATTACTCACCTGATACTGAAAAACTGTTGGGAAGTCACAATTTCTACCCACATCGTTACACAGGATTGGAATTTAACCAT TATCTTAAATGTACAGAAAAATTCAAGGGCTATAATTTAAACACCATGGCCTTTGTCAATTCGCAAGCAGCAACATTTGG TCCTTGGCCAACTCAAGATGGCCTTTGTACTCTTGAAGACCACAGAAGCCTTGAAATTGCGACACAAGTTAAACATTACA AACTCCTCGGTGGAATTGATGATGTGACTATTGCCAATGCTTATGCGAGCGAAGAAGAACTTAAAGCGATGAGCCAAGCA TTTAACGCAAGCATGCCTGAGATTAAAGTCGTTCCACGTGAAACAATCAGTGAAAATGAACGCAAATGTCTTTTTGAAGC GACACATAGCTACCGTGGTGATAAATCAGCTTACATGCTCCGTTCAACAATGACAAGAATCACTTATAAAGACCTTGAAT TCCCCGCTCACGATACTGATAAAATTCAACGTGGCGATGTCATTATTGACAACGAAGGCTATGGTCAATATAAAGGTGAA ACTCAAATCGCCTTACGTGAAATGGAAAATGATGGTCGAGTCAATGTCGTTGGACGTATCGCAGATGATGAATTATTCCT ACTCGATTTCCTAAAACCATGGAGCTCATTTAAACTTATCGAGAGCAAAAAATAA
Upstream 100 bases:
>100_bases GATATCGCTTGCAAAAATAAAATGAAAGCCTTATCATAGACTTAAGGTTTATTTCAGAAATAAAAAAAGGAAATAAACAA ATAAGAAAAAGGAGAAAAAA
Downstream 100 bases:
>100_bases TCGATAATCTATGCCTGTCAGTACTGACAGAACCTTAATTATGTTCAAAAAGTTTTTTTGAAAGTTATTTATTATTATAT TATAAAGGAGGAATTCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Protein
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDKEGVLAAFKKVVDYANQLGMEVMVDINPGLFTQLNIS YDDLSFFHEMGADGVRLDIGFTGAEEARMTRNPYGIKIEINMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNH YLKCTEKFKGYNLNTMAFVNSQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGGIDDVTIANAYASEEELKAMSQA FNASMPEIKVVPRETISENERKCLFEATHSYRGDKSAYMLRSTMTRITYKDLEFPAHDTDKIQRGDVIIDNEGYGQYKGE TQIALREMENDGRVNVVGRIADDELFLLDFLKPWSSFKLIESKK
Sequences:
>Translated_364_residues MGKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDKEGVLAAFKKVVDYANQLGMEVMVDINPGLFTQLNIS YDDLSFFHEMGADGVRLDIGFTGAEEARMTRNPYGIKIEINMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNH YLKCTEKFKGYNLNTMAFVNSQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGGIDDVTIANAYASEEELKAMSQA FNASMPEIKVVPRETISENERKCLFEATHSYRGDKSAYMLRSTMTRITYKDLEFPAHDTDKIQRGDVIIDNEGYGQYKGE TQIALREMENDGRVNVVGRIADDELFLLDFLKPWSSFKLIESKK >Mature_363_residues GKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDKEGVLAAFKKVVDYANQLGMEVMVDINPGLFTQLNISY DDLSFFHEMGADGVRLDIGFTGAEEARMTRNPYGIKIEINMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNHY LKCTEKFKGYNLNTMAFVNSQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGGIDDVTIANAYASEEELKAMSQAF NASMPEIKVVPRETISENERKCLFEATHSYRGDKSAYMLRSTMTRITYKDLEFPAHDTDKIQRGDVIIDNEGYGQYKGET QIALREMENDGRVNVVGRIADDELFLLDFLKPWSSFKLIESKK
Specific function: Unknown
COG id: COG3589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41349; Mature: 41218
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDKEGVLAAFKKVVDYANQ CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LGMEVMVDINPGLFTQLNISYDDLSFFHEMGADGVRLDIGFTGAEEARMTRNPYGIKIEI CCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEEEEEE NMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNHYLKCTEKFKGYNLNTMAFVN ECCCCCCHHHHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEEEEC SQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGGIDDVTIANAYASEEELKAMSQA CCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHH FNASMPEIKVVPRETISENERKCLFEATHSYRGDKSAYMLRSTMTRITYKDLEFPAHDTD HCCCCCCEEECCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC KIQRGDVIIDNEGYGQYKGETQIALREMENDGRVNVVGRIADDELFLLDFLKPWSSFKLI CCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEHHHCCCCCCCEE ESKK CCCC >Mature Secondary Structure GKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDKEGVLAAFKKVVDYANQ CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LGMEVMVDINPGLFTQLNISYDDLSFFHEMGADGVRLDIGFTGAEEARMTRNPYGIKIEI CCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEEEEEE NMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNHYLKCTEKFKGYNLNTMAFVN ECCCCCCHHHHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEEEEC SQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGGIDDVTIANAYASEEELKAMSQA CCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHH FNASMPEIKVVPRETISENERKCLFEATHSYRGDKSAYMLRSTMTRITYKDLEFPAHDTD HCCCCCCEEECCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC KIQRGDVIIDNEGYGQYKGETQIALREMENDGRVNVVGRIADDELFLLDFLKPWSSFKLI CCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEHHHCCCCCCCEE ESKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA