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The map label for this gene is ybdI

Identifier: 15672116

GI number: 15672116

Start: 135966

End: 136511

Strand: Direct

Name: ybdI

Synonym: L135900

Alternate gene names: 15672116

Gene position: 135966-136511 (Clockwise)

Preceding gene: 15672115

Following gene: 15672117

Centisome position: 5.75

GC content: 30.04

Gene sequence:

>546_bases
ATGGAGGCCGTGCATGATTTTTATCCAATTTTATTTTTAGTAATTTTGTTTATTGTTTTGTATATTGCAATTAAAACTGG
TGTTTTTGCGCATTTTAAAGAAACTTTTCGCTTGCAAAATTTGCTTTGGCTTCTTGGGTTTGTAATTGTGGGATATATTC
TCGGTAATATTGCACACTATTTATATCTGCGATTTGTTCCTGCACTTGATACAATCGTGGAAAATGAAGCTACTAATAAT
TTCGTTGACTCTTTTTTACCAACTTGGTTTGTATATATTCTTATGGTTGTCATTGCTCCAATTTATGAAGAGCTGATGTT
TAGGGAATATTTTTATCGTTTTTTTAGTCATAAATGGCTAGCTTATATTTTAAGTATTCTTCTATTTACATTAATTCATA
CTAGGTTGACATGGAGTTTTTTTGAATACTTACCAATGAGTGTAATCGTCACAAGTACTTTTCACCGATATAAGCGTGTG
AGTGATAGTATTATCGTGCATGGAGGATATAATCTAATGGTTTTGATTTTTCATATTATTATTTAA

Upstream 100 bases:

>100_bases
TGAGGAAAACAGATAAAACAACGATATTGAATAAGTTAAAGAGCATACTTTTAGTCTTCGGGACGGCATACTTTATCTTG
GACCTGGTGCTTTTGTTCCA

Downstream 100 bases:

>100_bases
TATAGAATTTATTATAAGTAGATTTGTTATTTTTTATTAACGTGGGGCTTTTATGATTGAACGTATAAAAAAATTTTTAC
GGACTAAATTCAAACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWLLGFVIVGYILGNIAHYLYLRFVPALDTIVENEATNN
FVDSFLPTWFVYILMVVIAPIYEELMFREYFYRFFSHKWLAYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRV
SDSIIVHGGYNLMVLIFHIII

Sequences:

>Translated_181_residues
MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWLLGFVIVGYILGNIAHYLYLRFVPALDTIVENEATNN
FVDSFLPTWFVYILMVVIAPIYEELMFREYFYRFFSHKWLAYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRV
SDSIIVHGGYNLMVLIFHIII
>Mature_181_residues
MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWLLGFVIVGYILGNIAHYLYLRFVPALDTIVENEATNN
FVDSFLPTWFVYILMVVIAPIYEELMFREYFYRFFSHKWLAYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRV
SDSIIVHGGYNLMVLIFHIII

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0177 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBDI_LACLA (Q9CJ67)

Other databases:

- EMBL:   AE005176
- PIR:   F86641
- RefSeq:   NP_266290.1
- GeneID:   1113741
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L135900
- NMPDR:   fig|272623.1.peg.141
- BioCyc:   LLAC272623:L135900-MONOMER
- InterPro:   IPR003675

Pfam domain/function: PF02517 Abi

EC number: NA

Molecular weight: Translated: 21601; Mature: 21601

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc04afa0)-; HASH(0x40629d10)-; HASH(0xc51e87c)-; HASH(0xbc9a0c0)-; HASH(0xc1e0ad8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWLLGFVIVGYILGNIAHY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLRFVPALDTIVENEATNNFVDSFLPTWFVYILMVVIAPIYEELMFREYFYRFFSHKWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRVSDSIIVHGGYNLMVLIFHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
I
H
>Mature Secondary Structure
MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWLLGFVIVGYILGNIAHY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLRFVPALDTIVENEATNNFVDSFLPTWFVYILMVVIAPIYEELMFREYFYRFFSHKWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRVSDSIIVHGGYNLMVLIFHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH
I
H

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471