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The map label for this gene is yabB

Identifier: 15671989

GI number: 15671989

Start: 12346

End: 12669

Strand: Direct

Name: yabB

Synonym: L12334

Alternate gene names: 15671989

Gene position: 12346-12669 (Clockwise)

Preceding gene: 15671988

Following gene: 15671990

Centisome position: 0.52

GC content: 30.86

Gene sequence:

>324_bases
ATGGAAATCTCTCAGATAATCAAAGAAAATCGTAAAATGAAAAATCTCAGTCAGGAAGAATTGGCGAAAAAAATGCATAT
TTCTCGTCAATCAATTTCAAAATGGGAGACAGGAAAATCACTACCAACAACAGACCAAATTATCTTACTTAGTGAAATTT
TCGATTGTTCTTTGGACACGTTGCTCAAAGGTGACAAAAAGATGGAAGAAAAAGCAAAACATGAAATTGATGACAAACGG
ACATTGAAGTTAATTTATAAGGTGGGTTGGGGATTTATCATTCCATTTCTCTTTACTTTAAAATTTATTTTACATTTATT
TTGA

Upstream 100 bases:

>100_bases
GAAATGAAGAAATGCACCGAATCGGTGCATTTTTGCAACCTAAAAATGCTTGAGTTGAAGAATAAAAAACGATACTCTTA
AAGCATGAAAGGAAGGCAAC

Downstream 100 bases:

>100_bases
TGAAAATAAAAAGGCCTTTTTGGTCTTTTTTTGTTTAGCGGAAGTAATTGATTGAATACTACACTTGTTCATAAATTACA
TTTAATAAATAAAAGTGTTT

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Transcription Regulator; Transcriptional Regulator Xre Family; Phage CI Repressor; Cro/CI Family Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTTDQIILLSEIFDCSLDTLLKGDKKMEEKAKHEIDDKR
TLKLIYKVGWGFIIPFLFTLKFILHLF

Sequences:

>Translated_107_residues
MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTTDQIILLSEIFDCSLDTLLKGDKKMEEKAKHEIDDKR
TLKLIYKVGWGFIIPFLFTLKFILHLF
>Mature_107_residues
MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTTDQIILLSEIFDCSLDTLLKGDKKMEEKAKHEIDDKR
TLKLIYKVGWGFIIPFLFTLKFILHLF

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12611; Mature: 12611

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTTDQIILLSEIFDCSLDT
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH
LLKGDKKMEEKAKHEIDDKRTLKLIYKVGWGFIIPFLFTLKFILHLF
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTTDQIILLSEIFDCSLDT
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH
LLKGDKKMEEKAKHEIDDKRTLKLIYKVGWGFIIPFLFTLKFILHLF
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA