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The map label for this gene is yyaL

Identifier: 15671988

GI number: 15671988

Start: 11119

End: 12234

Strand: Direct

Name: yyaL

Synonym: L0161

Alternate gene names: 15671988

Gene position: 11119-12234 (Clockwise)

Preceding gene: 30023968

Following gene: 15671989

Centisome position: 0.47

GC content: 38.35

Gene sequence:

>1116_bases
ATGGCTTTAACAGCAGGTATCGTTGGTTTACCAAACGTTGGTAAATCAACTCTTTTTAATGCAATTACAAAAGCAGGCGC
AGAAGCTGCAAACTATCCTTTTGCAACAATTGACCCAAATGTTGGGATGGTAGAAGTACCGGATGAACGTTTAAACAAGT
TAACAGAGTTGATTAAACCTAAGAAAACTGTTCCGACAACTTTTGAATTTACAGATATTGCTGGGATTGTTAAAGGGGCT
TCACGCGGAGAAGGTCTAGGAAATAAATTTCTTGCCAATATTCGTGAAGTAGATGCCATCATTCACGTTGTTCGAGCTTT
TGATGATGAAAATGTAATGCGTGAAAATAATCGTGAAGATGCTTTTATTGATCCAATGGCAGACATTGAAACAATTAATC
TTGAATTAATTTTGGCCGATTTAGAATCAGTCAATAAACGTTATGCGCGTGTTGAAAAAGTTGCTCGTACGGCAAAAGAT
AAAGATGCGGTCGCAGAATTTAATGTTTTGAAAAAGCTCAAACCGGTACTTGAAGATGGTAAATCAGCACGAACAATTGA
CTTTGACGAAGATGAAATAAAGGTTCTTAAAAGCTTGTTCTTATTGACAAGTAAACCAGTTCTTTATGTAGCTAATGTTT
CAGAAGATGAAGTAGGCGAACCTGATAATATCGAATACGTGAAACAAATTCGTGAGTTTGCGGCGACTGAAAATGCTGAA
GTTGCTGTGATTTCTGCTCGTGTTGAAGAAGAAATCTCAGAGTTGGAAGATGATGAAAAAGCAGAATTTTTGGAAGCAAT
TGGCTTAAAAGAATCTGGTGTTGATATGTTGACTCGTGCAGCTTACCACCTTCTTGGACTTGCCACTTACTTTACTGCTG
GTGAAAAAGAAGTCCGTGCTTGGACCTTCAAGCGTGGAATGAAAGCTCCACAAATGGCAGGAATTATTCATACAGACTTT
GAAAAAGGCTTTATCCGCGCAGTAACTATGTCTTATGATGATTTGCTTAAATACGGTTCAGAAAAAGCTGTTCGTGAAGC
CGGTCGCTTGCGTGAAGAAGGAAAAGAATATGTTGGTCAAGATGGCGACATTATGGAATTCCGTTTCAACGTGTAA

Upstream 100 bases:

>100_bases
ACTTAGAGATTTTCTATGATTTTCCTTGCCTTTATTGTGTTTTTAGGCGATTTACAGTATAATTAGAACTAATTAATCTT
AATTTTGGAGAATATAAAAC

Downstream 100 bases:

>100_bases
ACCTTGTAAATGAAATGAAGAAATGCACCGAATCGGTGCATTTTTGCAACCTAAAAATGCTTGAGTTGAAGAATAAAAAA
CGATACTCTTAAAGCATGAA

Product: GTP-dependent nucleic acid-binding protein EngD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVPTTFEFTDIAGIVKGA
SRGEGLGNKFLANIREVDAIIHVVRAFDDENVMRENNREDAFIDPMADIETINLELILADLESVNKRYARVEKVARTAKD
KDAVAEFNVLKKLKPVLEDGKSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEVGEPDNIEYVKQIREFAATENAE
VAVISARVEEEISELEDDEKAEFLEAIGLKESGVDMLTRAAYHLLGLATYFTAGEKEVRAWTFKRGMKAPQMAGIIHTDF
EKGFIRAVTMSYDDLLKYGSEKAVREAGRLREEGKEYVGQDGDIMEFRFNV

Sequences:

>Translated_371_residues
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVPTTFEFTDIAGIVKGA
SRGEGLGNKFLANIREVDAIIHVVRAFDDENVMRENNREDAFIDPMADIETINLELILADLESVNKRYARVEKVARTAKD
KDAVAEFNVLKKLKPVLEDGKSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEVGEPDNIEYVKQIREFAATENAE
VAVISARVEEEISELEDDEKAEFLEAIGLKESGVDMLTRAAYHLLGLATYFTAGEKEVRAWTFKRGMKAPQMAGIIHTDF
EKGFIRAVTMSYDDLLKYGSEKAVREAGRLREEGKEYVGQDGDIMEFRFNV
>Mature_370_residues
ALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVPTTFEFTDIAGIVKGAS
RGEGLGNKFLANIREVDAIIHVVRAFDDENVMRENNREDAFIDPMADIETINLELILADLESVNKRYARVEKVARTAKDK
DAVAEFNVLKKLKPVLEDGKSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEVGEPDNIEYVKQIREFAATENAEV
AVISARVEEEISELEDDEKAEFLEAIGLKESGVDMLTRAAYHLLGLATYFTAGEKEVRAWTFKRGMKAPQMAGIIHTDFE
KGFIRAVTMSYDDLLKYGSEKAVREAGRLREEGKEYVGQDGDIMEFRFNV

Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=374, Percent_Identity=43.048128342246, Blast_Score=298, Evalue=7e-81,
Organism=Homo sapiens, GI58761502, Length=226, Percent_Identity=40.2654867256637, Blast_Score=161, Evalue=1e-39,
Organism=Escherichia coli, GI1787454, Length=371, Percent_Identity=53.6388140161725, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789574, Length=145, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17509631, Length=370, Percent_Identity=41.3513513513514, Blast_Score=292, Evalue=2e-79,
Organism=Saccharomyces cerevisiae, GI6319499, Length=374, Percent_Identity=39.8395721925134, Blast_Score=256, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6321773, Length=389, Percent_Identity=35.9897172236504, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6321649, Length=158, Percent_Identity=38.6075949367089, Blast_Score=97, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24640873, Length=371, Percent_Identity=41.2398921832884, Blast_Score=275, Evalue=4e-74,
Organism=Drosophila melanogaster, GI24640877, Length=371, Percent_Identity=41.2398921832884, Blast_Score=275, Evalue=4e-74,
Organism=Drosophila melanogaster, GI24640875, Length=371, Percent_Identity=41.2398921832884, Blast_Score=275, Evalue=4e-74,
Organism=Drosophila melanogaster, GI24640879, Length=330, Percent_Identity=39.0909090909091, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24585318, Length=174, Percent_Identity=29.3103448275862, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 41254; Mature: 41123

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKP
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEECCCCCEEECCHHHHHHHHHHHCC
KKTVPTTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVMRENNRED
CCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
AFIDPMADIETINLELILADLESVNKRYARVEKVARTAKDKDAVAEFNVLKKLKPVLEDG
CCCCCCCCCEEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEVGEPDNIEYVKQIREFAATENAE
CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
VAVISARVEEEISELEDDEKAEFLEAIGLKESGVDMLTRAAYHLLGLATYFTAGEKEVRA
EEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
WTFKRGMKAPQMAGIIHTDFEKGFIRAVTMSYDDLLKYGSEKAVREAGRLREEGKEYVGQ
HHHHHCCCCCHHHCCEECCCHHCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
DGDIMEFRFNV
CCCEEEEEECC
>Mature Secondary Structure 
ALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKP
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEECCCCCEEECCHHHHHHHHHHHCC
KKTVPTTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVMRENNRED
CCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
AFIDPMADIETINLELILADLESVNKRYARVEKVARTAKDKDAVAEFNVLKKLKPVLEDG
CCCCCCCCCEEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEVGEPDNIEYVKQIREFAATENAE
CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
VAVISARVEEEISELEDDEKAEFLEAIGLKESGVDMLTRAAYHLLGLATYFTAGEKEVRA
EEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
WTFKRGMKAPQMAGIIHTDFEKGFIRAVTMSYDDLLKYGSEKAVREAGRLREEGKEYVGQ
HHHHHCCCCCHHHCCEECCCHHCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
DGDIMEFRFNV
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]