Click here to switch to the map view.

The map label for this gene is ychE [C]

Identifier: 15669873

GI number: 15669873

Start: 1660341

End: 1660958

Strand: Direct

Name: ychE [C]

Synonym: MJ1677

Alternate gene names: 15669873

Gene position: 1660341-1660958 (Clockwise)

Preceding gene: 15669872

Following gene: 15669874

Centisome position: 99.72

GC content: 34.63

Gene sequence:

>618_bases
ATGGATTTGCAATATTTTATATTGGCATTTTCATCTATATTCTCAATTTTAAACCCATTTGGTGCTGTTCCTGTATTTAT
AACATTAACTGAGTCATATCCAAAAAAGGAAAGGGATTTAGTAGCTAAGAAAACAGTTATTTATGCACTTGCTATATTAT
TGGCTTTTGCACTTTTTGGAGAGTGGATATTAAAATTTTTTGGTATATCATTAGATGCATTTAAGATTGCTGGAGGAATT
CTACTGCTCTTAATATCATTAGACATGGTTAGGGGTCAGCAGGAGGCTAAAATTCATAGAAAGGAAATTGAAGCAGCTTA
TGAGATTGATGAAATTGCTCTAATGCCTTTAGCAACTCCATTATTAGCTGGGCCTGGTTCAATAACTGCCTGTATGGTTG
CAATGGCTGAGGCATCAGACATTGGAGATAAGTTTTTGGTAATATTGGCTATACTACTATCTCTTGGAATAACCTACCTA
ACCCTATTATCAGCTGAGAGTGTTTTAGATAGGATTGGAAGATTGGGGATTAGGATATTAACAAGAATGATGGGTTTGAT
ATTAACAGCAATAGCAGTTCAGATGATAGTTAATGGAATTAGAGGGGCCTTACTCTAA

Upstream 100 bases:

>100_bases
TCCTCCCGGAGTCATATACACCATGACTGCATTTTTAAATGGGAATGTAATTGATTTATATGGGGGAATTAGAAGAAAAA
TAAAATTTTAATGTGAGACT

Downstream 100 bases:

>100_bases
AAAATTTGAGGTGATTACTTTGGATATAAACTTGGATAAATACAAAAACTTAACAAGAAGCTTGACAAGGGAATTTATTA
ACTTAAATCCAATACAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFGEWILKFFGISLDAFKIAGGI
LLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATPLLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYL
TLLSAESVLDRIGRLGIRILTRMMGLILTAIAVQMIVNGIRGALL

Sequences:

>Translated_205_residues
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFGEWILKFFGISLDAFKIAGGI
LLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATPLLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYL
TLLSAESVLDRIGRLGIRILTRMMGLILTAIAVQMIVNGIRGALL
>Mature_205_residues
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFGEWILKFFGISLDAFKIAGGI
LLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATPLLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYL
TLLSAESVLDRIGRLGIRILTRMMGLILTAIAVQMIVNGIRGALL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family

Homologues:

Organism=Escherichia coli, GI1787494, Length=204, Percent_Identity=36.2745098039216, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789842, Length=187, Percent_Identity=35.2941176470588, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1677_METJA (Q59071)

Other databases:

- EMBL:   L77117
- PIR:   C64509
- RefSeq:   NP_248687.1
- ProteinModelPortal:   Q59071
- GeneID:   1452586
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1677
- NMPDR:   fig|243232.1.peg.1724
- TIGR:   MJ1677
- HOGENOM:   HBG731519
- OMA:   ISIQMAL
- ProtClustDB:   CLSK2517766
- BioCyc:   MJAN243232:MJ_1677-MONOMER
- InterPro:   IPR002771
- TIGRFAMs:   TIGR00427

Pfam domain/function: PF01914 MarC

EC number: NA

Molecular weight: Translated: 22304; Mature: 22304

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe9a7b3c)-; HASH(0xed339ec)-; HASH(0xe9f4618)-; HASH(0xf0e13a0)-; HASH(0xdeac40c)-; HASH(0xe9f4720)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFG
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EWILKFFGISLDAFKIAGGILLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATP
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYLTLLSAESVLDRIGRLGIRIL
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRMMGLILTAIAVQMIVNGIRGALL
HHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFG
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EWILKFFGISLDAFKIAGGILLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATP
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYLTLLSAESVLDRIGRLGIRIL
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRMMGLILTAIAVQMIVNGIRGALL
HHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087