| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669870
Identifier: 15669870
GI number: 15669870
Start: 1656629
End: 1658533
Strand: Reverse
Name: 15669870
Synonym: MJ1674
Alternate gene names: NA
Gene position: 1658533-1656629 (Counterclockwise)
Preceding gene: 15669877
Following gene: 15669869
Centisome position: 99.61
GC content: 27.98
Gene sequence:
>1905_bases ATGTTGAAAGTCCTCATCTCCCCTTTAGGCGTTGGAGATACAAATACTGATGTTTATAAAAGGCAATATAAAACAGCAGA GTATAAATTTGAAGGAGATATCGATGGTATTGAAAGCCCATTTGTTTTGTCAGTTTTAATTGAAAAGTTGAAGGTTGATA AAGTTATTGTTGTTGGAACTGCAAAATCAATGTGGGAAAAATTATATGAATATTATGCCAAGGAAGTTGGAGAATTTGAC GAAGAATATTGGATTGAAATTGGGAAGAAAGTTGGAATGTCAAAATATGATAACTATGCTCTTTCAGAAGAAGATTTGAA GAAAATAGAGAAGGTTATTGATAAATATTTGAAAAAAATTAATCCAAATGCTGTTGGAGGTTCTAAATGCAAGATTATAA AGTATGGAATTGATAAGGATGAGATTTGGGAGAATTTTGATTTATTTATGAGTTTAATAAATGAAGTAAATGATGGAGAT GAGATTTATTTGGACATAACTCATTCATTTAGGTCTATTCCATTATTTATGTATGTTATGTTGGAGTTTATGAGGTATTT TAAAAATGTAAAGTTAAAGGGAATCTACTATGGAATGTTAGATGTAATCCGTGAATTGGGACATGCACCAGTTGTTGATT TAAGCCCGATATTTGAAATATCAGAGTGGATTAGAGGAATGTATGAATTCACCACTTATGGAAACAGTTACTTAATCTCA AAACTTTTAGAAAATGAAGATAAAGAGATAGCCGAAAAACTACAGAAAATCTCAAGATACATTGATGCTAATTATTTAAA AGAGTTGAGAGAGGAAGTTAAAACTCTAAAACCACTGTTAAATGAGAAAAAAGATACGGGAAGGTTTTTAAAATATTTCA TTCCTGAGTTGCATAAATTTATTGATAAATTAAAATATGAAGATTCAGATTTTGAGTTCCAAATATCTATGGCAAAATGG AACTTTGATAATAAAAAATACAGCTCTGGCTATTTATGTTTAACTGATTCAATATTTTGGAAATTATGTGAGCTTTATAA TTTACCGTCTGTTTATAAAAATAGGGAGGTTATGAAGGGAATAATATACAATCCATCCTTGAATAAAAAATATTCTGCGT TTGGGTCTATTAAAGATATGCATTACAAAAGATTAAGGAACATAAGAAACAAAATTGCCCATGCAGATGTTAGTAAAAAG GGAGATGATTTCAATCCTGAAAATGATTTAGAGGATGTTGTCAATTTACTGAAAAATGTCAATCTACCTGATTTTGATAA GATAATCGAGGATTTACTATTAGATGTTAAAAATAACCAAAATAATAAAACACTTAAATTGTTAAAAAATATTTTGAATA TACAAATAATTAGAAAGATTATTAAAGCATATAATTTTGAGAGCAATGAAATATACTGGGATTTTGTTAGTGGTTATCTC TTAAATAAGAATAATAAATGCAATAATGAAAAATTAAGAGAAATCATCGAGATATTCCACAAAAACATAGAGGATGCTGG TGAATTGGAGGAAGCATTTAATTTTGTAAAAAATACAGAAGATGAGGAATTGTTGGATAGTTTAGCATTACAAAATGCAA TCATGCATTATGCCCTCTTCAAACTTTCAAATGCTTATAATATCAAAAATAAGGAAGATAAAGAGGCAATTAAATGGGTT TTGTTAAATCAAAATCTATGTTCAAAGCATCCAATTTTGAAGGAGATAAATAACAACTACCACAAAATATTCAAAAATAA GGATAAACCTATGTCTAATGAGATACTTGAAGCATCTAAAAATATAATAAGACTGTTAAACAGTGATTTGTCAGAAATAA AAGATAGTGTTCCTCTAAATTTGATAATAATCAGATATAGAAGTTATAAAAATAATAGAAGGTGA
Upstream 100 bases:
>100_bases AAAATTAATTCATATTTGTATATTTTCAAATTTACAAAATAAAAAACTATTTATATGACTTTTTTATTATTTTTAAGGTT CCACAAATTTTTGAGGTGAA
Downstream 100 bases:
>100_bases AATCATGCCTAAAATGTTTTTATTATTTTCTCATAAACTTACAGATGACCAAATTAATGATGCAAGGAAAAATCTGAAAG TTGATGAATTTATTTACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR
Sequences:
>Translated_634_residues MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR >Mature_634_residues MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGTAKSMWEKLYEYYAKEVGEFD EEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKINPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGD EIYLDITHSFRSIPLFMYVMLEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKFIDKLKYEDSDFEFQISMAKW NFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKGIIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKK GDDFNPENDLEDVVNLLKNVNLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALFKLSNAYNIKNKEDKEAIKWV LLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASKNIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1674_METJA (Q59068)
Other databases:
- EMBL: L77117 - PIR: H64508 - RefSeq: NP_248684.1 - ProteinModelPortal: Q59068 - GeneID: 1452583 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1674 - NMPDR: fig|243232.1.peg.1721 - TIGR: MJ1674 - OMA: IFEISEW - ProtClustDB: CLSK2517765 - BioCyc: MJAN243232:MJ_1674-MONOMER - InterPro: IPR013383 - InterPro: IPR011742 - TIGRFAMs: TIGR02221 - TIGRFAMs: TIGR02549
Pfam domain/function: PF09530 Cas_TM1812
EC number: NA
Molecular weight: Translated: 74783; Mature: 74783
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGT CCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC AKSMWEKLYEYYAKEVGEFDEEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGDEIYLDITHSFRSIPLFMYVM CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH LEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS HHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKF HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IDKLKYEDSDFEFQISMAKWNFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKG HHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHCCHHHHHH IIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKKGDDFNPENDLEDVVNLLKNV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC NLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALF ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KLSNAYNIKNKEDKEAIKWVLLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASK HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCHHHHHHHHH NIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MLKVLISPLGVGDTNTDVYKRQYKTAEYKFEGDIDGIESPFVLSVLIEKLKVDKVIVVGT CCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC AKSMWEKLYEYYAKEVGEFDEEYWIEIGKKVGMSKYDNYALSEEDLKKIEKVIDKYLKKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NPNAVGGSKCKIIKYGIDKDEIWENFDLFMSLINEVNDGDEIYLDITHSFRSIPLFMYVM CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH LEFMRYFKNVKLKGIYYGMLDVIRELGHAPVVDLSPIFEISEWIRGMYEFTTYGNSYLIS HHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH KLLENEDKEIAEKLQKISRYIDANYLKELREEVKTLKPLLNEKKDTGRFLKYFIPELHKF HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IDKLKYEDSDFEFQISMAKWNFDNKKYSSGYLCLTDSIFWKLCELYNLPSVYKNREVMKG HHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHCCHHHHHH IIYNPSLNKKYSAFGSIKDMHYKRLRNIRNKIAHADVSKKGDDFNPENDLEDVVNLLKNV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC NLPDFDKIIEDLLLDVKNNQNNKTLKLLKNILNIQIIRKIIKAYNFESNEIYWDFVSGYL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE LNKNNKCNNEKLREIIEIFHKNIEDAGELEEAFNFVKNTEDEELLDSLALQNAIMHYALF ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KLSNAYNIKNKEDKEAIKWVLLNQNLCSKHPILKEINNNYHKIFKNKDKPMSNEILEASK HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCHHHHHHHHH NIIRLLNSDLSEIKDSVPLNLIIIRYRSYKNNRR HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087