Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is apgM1

Identifier: 15669808

GI number: 15669808

Start: 1587802

End: 1589037

Strand: Direct

Name: apgM1

Synonym: MJ1612

Alternate gene names: 15669808

Gene position: 1587802-1589037 (Clockwise)

Preceding gene: 15669807

Following gene: 15669812

Centisome position: 95.37

GC content: 38.27

Gene sequence:

>1236_bases
ATGAAAAAGGGAAAGTGTGTAATTTTTATTATAGATGGATTAGGAGACAGACCAAATGAGAAGGGTTTAACCCCTCTAAA
GGAGGCAAAGACCCCAACAATGGATAAAATTGCCAAGGAAGGGATTTGCGGTTTAATGAATGCCATAGATATTGGTATAA
GGCCAGGAAGTGACACAGCCCACTTAGCTATCTTAGGCTACAACCCTTACGAGGTTTATACTGGTAGAGGACCTTTAGAA
GCTTTTGGTGTTGGCTTAGATTTAAAGGAGGGAGATATAGCATTTAGATGTAATTTTGCCACTGTTGATGAGAACTTTGT
TGTTTTAGATAGGAGGGCTGGGAGAATAAGCCCTGAAGAAGCTGAAGAGTTAGAGAAGGAGATTGATGGTTTAGAGATTG
ATGGTGTTAAAGTTATCTTTAAATCTTCTAAGGGATATAGAGGAGCTTTAGTTTTGAGAGGAGAAGGCTTATCATGCAGA
GTTAGCGATGGGGACCCACATGAAGAGGGAGTTAAGGTTAGCGAGATAAAGCCATTGGATGATTCAGAAGAGGCAAAGAG
AACAGCAGAGATTTTAAATAAATTATTAAAGATTGTTTATGAAAAGTTAAACAACCACCCAATAAATGAGGAGAGGAGAA
AGAAGGGCTTACCTCCAGCTAACATAATACTGCCAAGAGGAGCTGGAGTTGTTCCAAAGATAGAGAAGTTCTCTGAAAAA
TACAACATGAAAGGGGCTTGTATCTGTGGAACTGGATTAATAAAGGGAATGGCTAAGATGATTGGTTTGGATGTTATAGA
GGTTGAGGGAGCTACTGGAACACCGAAGACAAACTTCATGGGCAAAGCTAAAGCTTTAGTTGAGGCTTTAAAGGAGTATG
ATTTTGTTTTAGTGAATGTTAAAGGTGCTGATGAAGCAAGCCATGATGGTAACTATGAACTTAAAAAAGAAGTTTTGGAG
AAAATAGATGAGATGCTTGCCTATGTATTTGAGCACATAAATAAGGATGAGGTTTATTTTGTTTTGACTGGAGACCATTC
AACACCAATAGAGATGAAAGACCACTCAGCAGACCCTATTCCAATAGTTATCTGGGGAAAGAGTGTCAGAGTTGATGATG
TTACAGAGTTTAACGAATTTGCATGTGCTAAAGGAGCTTTACATTGGATTAAGGGAGAGCATGTAATGAAAATATTATTG
GACTTAACTGGAAGAAATGAGAAATTTGGTGCTTAA

Upstream 100 bases:

>100_bases
AGATGATAAAACAGAAAGTATTTATATTGAGGATGAAGAGGGTAAAAAGAATAAAAGATATGAAAGAGATGAAGGATTTA
TAATTGCATGAGGGAGAAAG

Downstream 100 bases:

>100_bases
AATCTCTTTAATTAAATTTTTATCTTATCCTGTTTTATTAATGCCTCAATCACACTCCTTTTAACTGCCTTTGCTATCAT
CTCACCCATCTTTGTATGTC

Product: cofactor-independent phosphoglycerate mutase

Products: NA

Alternate protein names: BPG-independent PGAM 1; Phosphoglyceromutase 1; aPGAM 1; aPGAM-Mj1

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE
AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR
VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK
YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE
KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL
DLTGRNEKFGA

Sequences:

>Translated_411_residues
MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE
AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR
VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK
YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE
KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL
DLTGRNEKFGA
>Mature_411_residues
MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE
AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR
VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK
YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE
KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL
DLTGRNEKFGA

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate

COG id: COG3635

COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APGM1_METJA (Q59007)

Other databases:

- EMBL:   L77117
- PIR:   C64501
- RefSeq:   NP_248622.1
- ProteinModelPortal:   Q59007
- SMR:   Q59007
- GeneID:   1452521
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1612
- NMPDR:   fig|243232.1.peg.1659
- TIGR:   MJ1612
- HOGENOM:   HBG463247
- OMA:   DIAFRCN
- ProtClustDB:   PRK04024
- BioCyc:   MJAN243232:MJ_1612-MONOMER
- BRENDA:   5.4.2.1
- GO:   GO:0006096
- HAMAP:   MF_01402_A
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR004456
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF006392
- TIGRFAMs:   TIGR00306

Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.1

Molecular weight: Translated: 45227; Mature: 45227

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTA
CCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCE
HLAILGYNPYEVYTGRGPLEAFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEE
EEEEEECCCEEEEECCCCHHHHCCCCEECCCCEEEEEEEEEECCCEEEEECCCCCCCHHH
AEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCRVSDGDPHEEGVKVSEIKPLD
HHHHHHHHCCCEECCEEEEEECCCCCCEEEEEECCCCEEEECCCCCHHHCEEEEEECCCC
DSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNV
HCCCCEEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KGADEASHDGNYELKKEVLEKIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCE
PIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILLDLTGRNEKFGA
EEEEECCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTA
CCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCE
HLAILGYNPYEVYTGRGPLEAFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEE
EEEEEECCCEEEEECCCCHHHHCCCCEECCCCEEEEEEEEEECCCEEEEECCCCCCCHHH
AEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCRVSDGDPHEEGVKVSEIKPLD
HHHHHHHHCCCEECCEEEEEECCCCCCEEEEEECCCCEEEECCCCCHHHCEEEEEECCCC
DSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNV
HCCCCEEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
KGADEASHDGNYELKKEVLEKIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCE
PIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILLDLTGRNEKFGA
EEEEECCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 12062435; 12076796