| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is apgM1
Identifier: 15669808
GI number: 15669808
Start: 1587802
End: 1589037
Strand: Direct
Name: apgM1
Synonym: MJ1612
Alternate gene names: 15669808
Gene position: 1587802-1589037 (Clockwise)
Preceding gene: 15669807
Following gene: 15669812
Centisome position: 95.37
GC content: 38.27
Gene sequence:
>1236_bases ATGAAAAAGGGAAAGTGTGTAATTTTTATTATAGATGGATTAGGAGACAGACCAAATGAGAAGGGTTTAACCCCTCTAAA GGAGGCAAAGACCCCAACAATGGATAAAATTGCCAAGGAAGGGATTTGCGGTTTAATGAATGCCATAGATATTGGTATAA GGCCAGGAAGTGACACAGCCCACTTAGCTATCTTAGGCTACAACCCTTACGAGGTTTATACTGGTAGAGGACCTTTAGAA GCTTTTGGTGTTGGCTTAGATTTAAAGGAGGGAGATATAGCATTTAGATGTAATTTTGCCACTGTTGATGAGAACTTTGT TGTTTTAGATAGGAGGGCTGGGAGAATAAGCCCTGAAGAAGCTGAAGAGTTAGAGAAGGAGATTGATGGTTTAGAGATTG ATGGTGTTAAAGTTATCTTTAAATCTTCTAAGGGATATAGAGGAGCTTTAGTTTTGAGAGGAGAAGGCTTATCATGCAGA GTTAGCGATGGGGACCCACATGAAGAGGGAGTTAAGGTTAGCGAGATAAAGCCATTGGATGATTCAGAAGAGGCAAAGAG AACAGCAGAGATTTTAAATAAATTATTAAAGATTGTTTATGAAAAGTTAAACAACCACCCAATAAATGAGGAGAGGAGAA AGAAGGGCTTACCTCCAGCTAACATAATACTGCCAAGAGGAGCTGGAGTTGTTCCAAAGATAGAGAAGTTCTCTGAAAAA TACAACATGAAAGGGGCTTGTATCTGTGGAACTGGATTAATAAAGGGAATGGCTAAGATGATTGGTTTGGATGTTATAGA GGTTGAGGGAGCTACTGGAACACCGAAGACAAACTTCATGGGCAAAGCTAAAGCTTTAGTTGAGGCTTTAAAGGAGTATG ATTTTGTTTTAGTGAATGTTAAAGGTGCTGATGAAGCAAGCCATGATGGTAACTATGAACTTAAAAAAGAAGTTTTGGAG AAAATAGATGAGATGCTTGCCTATGTATTTGAGCACATAAATAAGGATGAGGTTTATTTTGTTTTGACTGGAGACCATTC AACACCAATAGAGATGAAAGACCACTCAGCAGACCCTATTCCAATAGTTATCTGGGGAAAGAGTGTCAGAGTTGATGATG TTACAGAGTTTAACGAATTTGCATGTGCTAAAGGAGCTTTACATTGGATTAAGGGAGAGCATGTAATGAAAATATTATTG GACTTAACTGGAAGAAATGAGAAATTTGGTGCTTAA
Upstream 100 bases:
>100_bases AGATGATAAAACAGAAAGTATTTATATTGAGGATGAAGAGGGTAAAAAGAATAAAAGATATGAAAGAGATGAAGGATTTA TAATTGCATGAGGGAGAAAG
Downstream 100 bases:
>100_bases AATCTCTTTAATTAAATTTTTATCTTATCCTGTTTTATTAATGCCTCAATCACACTCCTTTTAACTGCCTTTGCTATCAT CTCACCCATCTTTGTATGTC
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM 1; Phosphoglyceromutase 1; aPGAM 1; aPGAM-Mj1
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL DLTGRNEKFGA
Sequences:
>Translated_411_residues MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL DLTGRNEKFGA >Mature_411_residues MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTAHLAILGYNPYEVYTGRGPLE AFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEEAEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCR VSDGDPHEEGVKVSEIKPLDDSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNVKGADEASHDGNYELKKEVLE KIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPIPIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILL DLTGRNEKFGA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APGM1_METJA (Q59007)
Other databases:
- EMBL: L77117 - PIR: C64501 - RefSeq: NP_248622.1 - ProteinModelPortal: Q59007 - SMR: Q59007 - GeneID: 1452521 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1612 - NMPDR: fig|243232.1.peg.1659 - TIGR: MJ1612 - HOGENOM: HBG463247 - OMA: DIAFRCN - ProtClustDB: PRK04024 - BioCyc: MJAN243232:MJ_1612-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01402_A - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 - Gene3D: G3DSA:3.40.720.10 - PIRSF: PIRSF006392 - TIGRFAMs: TIGR00306
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core
EC number: =5.4.2.1
Molecular weight: Translated: 45227; Mature: 45227
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTA CCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCE HLAILGYNPYEVYTGRGPLEAFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEE EEEEEECCCEEEEECCCCHHHHCCCCEECCCCEEEEEEEEEECCCEEEEECCCCCCCHHH AEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCRVSDGDPHEEGVKVSEIKPLD HHHHHHHHCCCEECCEEEEEECCCCCCEEEEEECCCCEEEECCCCCHHHCEEEEEECCCC DSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNV HCCCCEEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE KGADEASHDGNYELKKEVLEKIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCE PIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILLDLTGRNEKFGA EEEEECCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKGKCVIFIIDGLGDRPNEKGLTPLKEAKTPTMDKIAKEGICGLMNAIDIGIRPGSDTA CCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCE HLAILGYNPYEVYTGRGPLEAFGVGLDLKEGDIAFRCNFATVDENFVVLDRRAGRISPEE EEEEEECCCEEEEECCCCHHHHCCCCEECCCCEEEEEEEEEECCCEEEEECCCCCCCHHH AEELEKEIDGLEIDGVKVIFKSSKGYRGALVLRGEGLSCRVSDGDPHEEGVKVSEIKPLD HHHHHHHHCCCEECCEEEEEECCCCCCEEEEEECCCCEEEECCCCCHHHCEEEEEECCCC DSEEAKRTAEILNKLLKIVYEKLNNHPINEERRKKGLPPANIILPRGAGVVPKIEKFSEK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH YNMKGACICGTGLIKGMAKMIGLDVIEVEGATGTPKTNFMGKAKALVEALKEYDFVLVNV HCCCCEEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE KGADEASHDGNYELKKEVLEKIDEMLAYVFEHINKDEVYFVLTGDHSTPIEMKDHSADPI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCE PIVIWGKSVRVDDVTEFNEFACAKGALHWIKGEHVMKILLDLTGRNEKFGA EEEEECCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 12062435; 12076796