Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669806

Identifier: 15669806

GI number: 15669806

Start: 1584520

End: 1586367

Strand: Direct

Name: 15669806

Synonym: MJ1610

Alternate gene names: NA

Gene position: 1584520-1586367 (Clockwise)

Preceding gene: 15669805

Following gene: 15669807

Centisome position: 95.17

GC content: 32.41

Gene sequence:

>1848_bases
GTGATTTATATGGGTGGAATCGTTGGAAACAATAGTTTATTAGCCAAAATTGGAGATTATGGGGAAATTGAATACCTTTT
TTATCCCCAAGTTGGTTATGAAACTCATTTCTTTGACTCTGCATTGGCAGTTTATGATAAAAAAGTAAAGTGGCATTGGG
ATGATGATTGGGATATAACCCAAAAATACATTGAGGAAACGAACATATTTAAAACTATCTTAGAAGATGATAAGATTATA
TTAACCATTAAAGATTTTGTGCCAGTATCTCACAACGTGCTTATAAGAAGAGTGTATATAAAAAATAAACTCGATAAAAA
ATTAAATTTTAAGCTCTTTTTTTACGAAAATTTGAGAATTGGTGAAAACCCAATAACAAATACAGTTAAATTCTTAGAAG
ATGGTTGTATCGTTAAATATAATGGAAAATATATTTTTTGCATTGGAAGTGATAAAAGAATAGATTCATTTCAGTGTGGA
AATAGATACAGTAAAACAAGTGCTTACATAGACATAGAAAATGGGATATTGAAGGAGCATAAAGAGAGTTCTGGATTATT
AACCGATAGTGCAATATCATGGAATATAAAGATTGATGAAAAAAGAAGTTTGGCATTCAACATCTACATACTTCCACAAA
GATTCGATGGAGATTTTTCAATAATAACTGAACAACTAAAGATTATAATGAATAACAGTGAAAACATTAAAAATCTCTCA
ATGAATTATTGGAAACATATTATAGGGGAGATAAATAGATTTATACATCCTGAGCTTAGGCAAAATAATAAGATTTATTC
TATAACTAAAAGGGCTTTAATGACACTTTTAATGTTATGTGATAAGGAAGGAGGGATTATAGCGGCTCCATCTCTACATC
CAGATTATAGATACGTGTGGGGAAGAGATGGAAGTTATATCTCAATTGCTTTGGACTTATTTGGCATAAGGAACATTCCA
GACAGATTTTTTGAATTCATGTCTAAGATACAAAATGCAGACGGTTCATGGCTACAAAATTATTATGTTAATGGAAAACC
ACGATTAACTGCAATACAGACTGACCAAATTGGTTCCATATTATGGGCAATGGATGTGCATTACAGATTAACTGGGGATA
GAAAGTTCGTTGAGAGATACTGGAACACTATAGAGAAAGCTGCTAATTATTTAAGGTTGGTAGCTTTAAACTTTACTCCA
TGCTTCGATTTGTGGGAAGAGAGGTTTGGAGTATTTGCTTATACAATGGGAGCTACTTACGCTGGATTGAAATGTGCATA
CAGCATGAGTAAGGCAGTGAATAAAAGGGATAAAGTTAAGGATTGGGGAAAAACCATAGAATTTTTAAAACATGAGGTTC
CAAAGAGATTTTATTTGGAAGATGAGGAAAGATTTGCTAAATCAATAAATCCTTTAGACAAGACGATAGACACAAGCATA
TTGGGTTTAAGTTACCCTTTCAATTTGATTGATGTTGATGATGAGAGAATGATAAAAACAGCCGAAGCAATTGAAAAAGC
TTTCAAATATAAGGTTGGAGGGATTGGGAGATATCCAGAAGACATTTACTTTGGAGGCAATCCATGGATTATAACCACAT
TATGGCTTTCTTTGTATTATAGAAGGTTATACAAGGTTTTAAAAGAAAAAGATGATAATGGGGCAGATATTTATCTACAA
AAATCTAAGAAGTTGTTTAATTGGGTGATGAAATACAGCTTTGATGGGCTGTTTCCAGAGCAAATTCATAAAGAATTAGG
TGTGCCAATGTCCGCTATGCCTTTAGGCTGGAGCAATGCAATGTTCCTCATTTATGTGTATGAGAATGATAAGGTCATAA
TACCATAA

Upstream 100 bases:

>100_bases
TCCTGTACCAATAGGGCGAAGCCCTATGGCTGTGAAGGCTATAAAAAGAATATTGTAGGTTTTTCGCAAAAGGCAATAGA
ATATTAAAAAAATATATCGT

Downstream 100 bases:

>100_bases
ATAAATTTTTGAGATGAGAGTATGTTAATAACGTTTAATTTTGAGGTGCATCAACCACATAGGCTAAATAAGGAGATAAA
CCAAAACGGAAATACTTTAT

Product: glucoamylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII
LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG
NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS
MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP
DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP
CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI
LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ
KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP

Sequences:

>Translated_615_residues
MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII
LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG
NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS
MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP
DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP
CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI
LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ
KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP
>Mature_615_residues
MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDITQKYIEETNIFKTILEDDKII
LTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRIGENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCG
NRYSKTSAYIDIENGILKEHKESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS
MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVWGRDGSYISIALDLFGIRNIP
DRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSILWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTP
CFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI
LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDDNGADIYLQ
KSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKVIIP

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 15 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1610_METJA (Q59005)

Other databases:

- EMBL:   L77117
- PIR:   A64501
- RefSeq:   NP_248620.1
- ProteinModelPortal:   Q59005
- SMR:   Q59005
- GeneID:   1452519
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1610
- NMPDR:   fig|243232.1.peg.1657
- TIGR:   MJ1610
- HOGENOM:   HBG539006
- OMA:   IKRYEND
- ProtClustDB:   CLSK876642
- BioCyc:   MJAN243232:MJ_1610-MONOMER
- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR006465
- InterPro:   IPR000165
- InterPro:   IPR011613
- Gene3D:   G3DSA:1.50.10.10
- TIGRFAMs:   TIGR01577

Pfam domain/function: PF00723 Glyco_hydro_15; SSF48208 Glyco_trans_6hp

EC number: NA

Molecular weight: Translated: 72009; Mature: 72009

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00820 GLUCOAMYLASE

Important sites: ACT_SITE 403-403 ACT_SITE 406-406

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDIT
CEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH
QKYIEETNIFKTILEDDKIILTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRI
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEECCCC
GENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCGNRYSKTSAYIDIENGILKEH
CCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHC
KESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS
CCCCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHEECCCCCCHHHH
MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVW
HHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEE
GRDGSYISIALDLFGIRNIPDRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSI
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEHHEEECCCCEEEEEECCCCCCE
LWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTPCFDLWEERFGVFAYTMGATY
EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCEEEEECCCHH
AGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCE
LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYY
EEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEHHHHHHHHHH
RRLYKVLKEKDDNGADIYLQKSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNA
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCC
MFLIYVYENDKVIIP
EEEEEEEECCEEECC
>Mature Secondary Structure
MIYMGGIVGNNSLLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYDKKVKWHWDDDWDIT
CEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH
QKYIEETNIFKTILEDDKIILTIKDFVPVSHNVLIRRVYIKNKLDKKLNFKLFFYENLRI
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEECCCC
GENPITNTVKFLEDGCIVKYNGKYIFCIGSDKRIDSFQCGNRYSKTSAYIDIENGILKEH
CCCCCHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHC
KESSGLLTDSAISWNIKIDEKRSLAFNIYILPQRFDGDFSIITEQLKIIMNNSENIKNLS
CCCCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHEECCCCCCHHHH
MNYWKHIIGEINRFIHPELRQNNKIYSITKRALMTLLMLCDKEGGIIAAPSLHPDYRYVW
HHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEE
GRDGSYISIALDLFGIRNIPDRFFEFMSKIQNADGSWLQNYYVNGKPRLTAIQTDQIGSI
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEHHEEECCCCEEEEEECCCCCCE
LWAMDVHYRLTGDRKFVERYWNTIEKAANYLRLVALNFTPCFDLWEERFGVFAYTMGATY
EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCEEEEECCCHH
AGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRFYLEDEERFAKSINPLDKTIDTSI
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCE
LGLSYPFNLIDVDDERMIKTAEAIEKAFKYKVGGIGRYPEDIYFGGNPWIITTLWLSLYY
EEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEHHHHHHHHHH
RRLYKVLKEKDDNGADIYLQKSKKLFNWVMKYSFDGLFPEQIHKELGVPMSAMPLGWSNA
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCC
MFLIYVYENDKVIIP
EEEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087