Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669743

Identifier: 15669743

GI number: 15669743

Start: 1526057

End: 1526425

Strand: Direct

Name: 15669743

Synonym: MJ1548

Alternate gene names: NA

Gene position: 1526057-1526425 (Clockwise)

Preceding gene: 15669742

Following gene: 15669744

Centisome position: 91.66

GC content: 29.81

Gene sequence:

>369_bases
ATGAGATTACAAAAAGGGCTTTATTATATTTCTCTTCAAGTATGTGTTGATATTACTATGGACGTTGTAGCAATGCTCGT
TAAAGACATTGGGTTGAATGTTGAAGATGATTATACAAACATTAAGAAACTTTTGAAGCATGATGTTATTACAAAAGATG
AAGCTACTCTACTAAAACAATATAACAGGCTTAGAAACGCTATTGTCCATAAATACGATAAATTAAACTTAGAAGTTGTA
AAAGAAGGTTTAAAAAGAATTGATGAACTCTATGAAATCGCATACGAAAGTATGCGAGTAATGAAATGCGAAGCATTTCA
TCTGATAATAATTAAACTCATTGAATTCTATGAAAAGGTGGAAGAATGA

Upstream 100 bases:

>100_bases
TGTTGAGGAGGAGATTTAATGCAAAGAAAGAAGAGATACTTGGATAAGCTTGAAAAGTTTGGGGAAGAATATTACTTCAT
AAAAGAACATGAAATAAGGG

Downstream 100 bases:

>100_bases
GAGATGTTGCCATTATCGGCTATGGACAGACAAAGTTTGGCGAGCTATGGGAAAGAAGTTTTAGAAGCTTGATTGTTGAG
GCTGGTGTTAAGGCAGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV
KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE

Sequences:

>Translated_122_residues
MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV
KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE
>Mature_122_residues
MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQYNRLRNAIVHKYDKLNLEVV
KEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKVEE

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family. MJ1548 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1548_METJA (Q58943)

Other databases:

- EMBL:   L77117
- PIR:   C64493
- RefSeq:   NP_248556.1
- ProteinModelPortal:   Q58943
- GeneID:   1452456
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1548
- NMPDR:   fig|243232.1.peg.1593
- TIGR:   MJ1548
- OMA:   VEREINF
- ProtClustDB:   CLSK541594
- BioCyc:   MJAN243232:MJ_1548-MONOMER
- InterPro:   IPR008201

Pfam domain/function: PF01934 DUF86

EC number: NA

Molecular weight: Translated: 14470; Mature: 14470

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
YNRLRNAIVHKYDKLNLEVVKEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EE
CC
>Mature Secondary Structure
MRLQKGLYYISLQVCVDITMDVVAMLVKDIGLNVEDDYTNIKKLLKHDVITKDEATLLKQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
YNRLRNAIVHKYDKLNLEVVKEGLKRIDELYEIAYESMRVMKCEAFHLIIIKLIEFYEKV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087