Click here to switch to the map view.

The map label for this gene is 15669740

Identifier: 15669740

GI number: 15669740

Start: 1523865

End: 1524590

Strand: Direct

Name: 15669740

Synonym: MJ1545

Alternate gene names: NA

Gene position: 1523865-1524590 (Clockwise)

Preceding gene: 15669738

Following gene: 15669741

Centisome position: 91.53

GC content: 30.85

Gene sequence:

>726_bases
TTGACATTTTATTTTTATTTTGTGATTAATATGGAGAAAGTAGCAATATACATTATAGGAGATATTGTTTTAGCTGAAAA
TACTGGAAAAGCTCTAAAAAAATGGAGGAATTTATTCAACATCCAGCAGATTGAGTTAGCTAAATACTTAAACGTTTCTC
CATCCGTTATAAGTGATTATGAAGTTGGAAGAAGAAAAAACCCAGGAGTGAATATTATAAAAAAGTATGTTTTGGCATTA
ATAGAAATAGATAAGGAGAAGGGAGGACAAACAATAAAAGCATTAAAAAGAATTTTAGATAAAAGCCCTTCAATGAAGGC
AATTTTATCAATAAAAGAGTATGAAAACCCAATAACCCTTAATGAATTTGTAAATATTATTGATGGAGAAATTGCCGTTG
GAGATAACTCAGACACTCCAATATATGGGCATACAGTTGTTGATAGTATAAAGGCAATATTAGAGATGACAGGAGATGAT
TTCTATCATTTATACGGATGGACTACTGAAAGAGCTTTAATATTCACAAACGTCTCTACTGGAAGAAGCCCAATGGTTGC
TGTTAGAGTCAGCATAATGAAGCCAAGAGTTGTTGTTTTGCAGGGAATAAATAAAGACAAGATAGACAGCTTAGCTTTAA
AATTAGCTGAGATTGATAACATCCCACTAATAACAACCCATTTAGATACTAAAGAACTTATAAAAAGACTAAATGAGATA
AAATAA

Upstream 100 bases:

>100_bases
TTTATGTCTAATATATTAGACAAAGTATTTAAATCTTCTCTTTACAATATCCGACAATAAACATAATGCATTTCAACAAA
ATCAAAAACTTTATATAATA

Downstream 100 bases:

>100_bases
GGGGGAAATTATGGCGGGTATTGTTGGTTATGGAGCATACATCCCAAAATATAGGATAAAAGTTGAAGAAATAGCAAGAG
TATGGAACAAAGACCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTFYFYFVINMEKVAIYIIGDIVLAENTGKALKKWRNLFNIQQIELAKYLNVSPSVISDYEVGRRKNPGVNIIKKYVLAL
IEIDKEKGGQTIKALKRILDKSPSMKAILSIKEYENPITLNEFVNIIDGEIAVGDNSDTPIYGHTVVDSIKAILEMTGDD
FYHLYGWTTERALIFTNVSTGRSPMVAVRVSIMKPRVVVLQGINKDKIDSLALKLAEIDNIPLITTHLDTKELIKRLNEI
K

Sequences:

>Translated_241_residues
MTFYFYFVINMEKVAIYIIGDIVLAENTGKALKKWRNLFNIQQIELAKYLNVSPSVISDYEVGRRKNPGVNIIKKYVLAL
IEIDKEKGGQTIKALKRILDKSPSMKAILSIKEYENPITLNEFVNIIDGEIAVGDNSDTPIYGHTVVDSIKAILEMTGDD
FYHLYGWTTERALIFTNVSTGRSPMVAVRVSIMKPRVVVLQGINKDKIDSLALKLAEIDNIPLITTHLDTKELIKRLNEI
K
>Mature_240_residues
TFYFYFVINMEKVAIYIIGDIVLAENTGKALKKWRNLFNIQQIELAKYLNVSPSVISDYEVGRRKNPGVNIIKKYVLALI
EIDKEKGGQTIKALKRILDKSPSMKAILSIKEYENPITLNEFVNIIDGEIAVGDNSDTPIYGHTVVDSIKAILEMTGDDF
YHLYGWTTERALIFTNVSTGRSPMVAVRVSIMKPRVVVLQGINKDKIDSLALKLAEIDNIPLITTHLDTKELIKRLNEIK

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1545_METJA (Q58940)

Other databases:

- EMBL:   L77117
- PIR:   H64492
- RefSeq:   NP_248553.1
- ProteinModelPortal:   Q58940
- SMR:   Q58940
- GeneID:   1452453
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1545
- NMPDR:   fig|243232.1.peg.1590
- TIGR:   MJ1545
- HOGENOM:   HBG297384
- OMA:   DYESGRR
- ProtClustDB:   CLSK862785
- BioCyc:   MJAN243232:MJ_1545-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982
- PIRSF:   PIRSF037724
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 27274; Mature: 27143

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFYFYFVINMEKVAIYIIGDIVLAENTGKALKKWRNLFNIQQIELAKYLNVSPSVISDY
CEEEEEEEEEECEEEEEEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHCCH
EVGRRKNPGVNIIKKYVLALIEIDKEKGGQTIKALKRILDKSPSMKAILSIKEYENPITL
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHEEEEHHHCCCCEEH
NEFVNIIDGEIAVGDNSDTPIYGHTVVDSIKAILEMTGDDFYHLYGWTTERALIFTNVST
HHHHHHHCCEEEECCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCC
GRSPMVAVRVSIMKPRVVVLQGINKDKIDSLALKLAEIDNIPLITTHLDTKELIKRLNEI
CCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCC
K
C
>Mature Secondary Structure 
TFYFYFVINMEKVAIYIIGDIVLAENTGKALKKWRNLFNIQQIELAKYLNVSPSVISDY
EEEEEEEEEECEEEEEEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHCCH
EVGRRKNPGVNIIKKYVLALIEIDKEKGGQTIKALKRILDKSPSMKAILSIKEYENPITL
HCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHEEEEHHHCCCCEEH
NEFVNIIDGEIAVGDNSDTPIYGHTVVDSIKAILEMTGDDFYHLYGWTTERALIFTNVST
HHHHHHHCCEEEECCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCC
GRSPMVAVRVSIMKPRVVVLQGINKDKIDSLALKLAEIDNIPLITTHLDTKELIKRLNEI
CCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087