Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669735

Identifier: 15669735

GI number: 15669735

Start: 1517054

End: 1517464

Strand: Direct

Name: 15669735

Synonym: MJ1540

Alternate gene names: NA

Gene position: 1517054-1517464 (Clockwise)

Preceding gene: 15669734

Following gene: 15669738

Centisome position: 91.12

GC content: 22.87

Gene sequence:

>411_bases
TTGCTTAAAGAACTCAACTATTTATTTTTGTTTCAGAGATTGATAAAAAATGGTAGTTTAGAAATAGCATTAACGAATAT
TTTTTCTTTAGGGATTAGTAGAGATTATATCACAATTAATATTGAGAATATAAAAACATTAAAAGAAATTATGGAAGCTG
TTTCTTCAAAATCAGCGAATAAGAAGTTAAAAAGTTTCTTAGAAAAAATTGAGGATTTAAAGATTTTTTTATCAGAGGCT
TCAAAAATAGCTGAAATTTTAGTTAATAATAGGAAAACTTTTATTTTGAAATATAAAGGTAAGGAGGTTTTAATTGTTGG
TTATGATGCAAGAGGAGGAATATTTCTAAAAAATATAAAAATTACTGACAAATTAGCTTTGATAAAAATGTTAAATGAAT
TCAAAAATTAG

Upstream 100 bases:

>100_bases
GAGGTTAAAATTGTATTTAACAAATTGACCATTGATGGAGAAGTAGGCTTAAAAATTATCCCATTAAAGAAAGAGAAAAA
GGAATAAAATAAGTGGGACT

Downstream 100 bases:

>100_bases
CTTCTCAAAATCTCATACATTTCTTCAGCTTTTTCATAGACTTTCTCTTCATCAACAGTTAAAATCTCTCCATCCCTCAT
AACTATATTTCCATCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLKELNYLFLFQRLIKNGSLEIALTNIFSLGISRDYITINIENIKTLKEIMEAVSSKSANKKLKSFLEKIEDLKIFLSEA
SKIAEILVNNRKTFILKYKGKEVLIVGYDARGGIFLKNIKITDKLALIKMLNEFKN

Sequences:

>Translated_136_residues
MLKELNYLFLFQRLIKNGSLEIALTNIFSLGISRDYITINIENIKTLKEIMEAVSSKSANKKLKSFLEKIEDLKIFLSEA
SKIAEILVNNRKTFILKYKGKEVLIVGYDARGGIFLKNIKITDKLALIKMLNEFKN
>Mature_136_residues
MLKELNYLFLFQRLIKNGSLEIALTNIFSLGISRDYITINIENIKTLKEIMEAVSSKSANKKLKSFLEKIEDLKIFLSEA
SKIAEILVNNRKTFILKYKGKEVLIVGYDARGGIFLKNIKITDKLALIKMLNEFKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1540_METJA (Q58935)

Other databases:

- EMBL:   L77117
- PIR:   C64492
- RefSeq:   NP_248548.1
- ProteinModelPortal:   Q58935
- GeneID:   1452448
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1540
- NMPDR:   fig|243232.1.peg.1585
- TIGR:   MJ1540
- OMA:   KTFILKY
- ProtClustDB:   CLSK2517745
- BioCyc:   MJAN243232:MJ_1540-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15633; Mature: 15633

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKELNYLFLFQRLIKNGSLEIALTNIFSLGISRDYITINIENIKTLKEIMEAVSSKSAN
CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHH
KKLKSFLEKIEDLKIFLSEASKIAEILVNNRKTFILKYKGKEVLIVGYDARGGIFLKNIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEEEEEE
ITDKLALIKMLNEFKN
EHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKELNYLFLFQRLIKNGSLEIALTNIFSLGISRDYITINIENIKTLKEIMEAVSSKSAN
CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHH
KKLKSFLEKIEDLKIFLSEASKIAEILVNNRKTFILKYKGKEVLIVGYDARGGIFLKNIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEEEEEE
ITDKLALIKMLNEFKN
EHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087