| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669700
Identifier: 15669700
GI number: 15669700
Start: 1478759
End: 1480072
Strand: Reverse
Name: 15669700
Synonym: MJ1506
Alternate gene names: NA
Gene position: 1480072-1478759 (Counterclockwise)
Preceding gene: 15669704
Following gene: 15669699
Centisome position: 88.89
GC content: 29.38
Gene sequence:
>1314_bases TTGCTTTATATTCTTAAATGCAAAAGTAATTATATCATCAACTTTCATAGACTTCCCCAAAAAACATCTAAAGCTTTATA TACAAATATAAGCTTAAGCTTTATATATAGATTTATGTGGGGGATTATGATGAAGAAACTTTTGATAATTTTAATTGGAT TTATTTTGCTATCTTCAATATCTGCCATTCAAATAGATGCTCCTCAGTATCAGCCGAATGTTATTCATCCTGGGGATGAT GTGGATTTGTGGATTAAGATAAACAATGATAATTATGATAATGAAGTTAAAAACATAGTTGTTGAAGTAACTCCACACTA TCCATTTGAGTTGAGGCAGGTTAATCCAATTAAGGGGAAAGCAACAATCAGCCATTTAAATCCTGGAGAATCAGACACTG TATATTTCAAACTACATGTTGATGAAAACGCCCCATCAAGAGATTATAGGATAGACGTAAAAGTAAGTTATGATGAAGTT GATAAAGAGGATGGAAAAGAAACAAGCCACCACTATGAAATAACTAAAATCTATTATCTACATGTTTATGGAATAGCAAG CTTTGAAATTAATATAGATGATACTTCAATAATTCCAGGAAAAACAAAAACTATAAAATTAGACATAAAAAATGTAGGAA CTGGAAATGCAAAATATTTAAACCTTTATTTAATTGGAAATGATAAAATCAATATTTTAGGAGGAAGTTTAATTTTTGTT GGATGTTTAAAAGCAAATAATCAATATATCATCCCTATAAAAATATACGCAGTTCCAGAAATTGAGGATGGCATATACTC AATTAATGCAAACTTATTTTGGGTTGGGGAGGATGGTAAGCAGTATAATTCAACAATTCCTTTAAATATAAGGGTTGTAA AGAAGATTTATGCAAACCAGCCGTATATTTATTTAGATGATGTAAAAAATAAAGGAGATTATATAGAGATAACTATTGGA ATTGCAAATAGGGGAACTACAAAGATTAAGCATTGTGTAATGACTTTAACTGCAAATGGGAGGAATTATACCAAGTATAT TGGAGATTTGGATGAAGATGATTATGACACTTCAATCTTTGAAATAAAGGAGTTTGGGGATATTCCAATTAAGGTAACTG TTACATACTTTGATGACTATCACAACCCATATAACGCTACAGAGACATTCAATATACATGTAGAAAAAGTTAAAAAAGAG GAATCATTAAGTCCAATGTATATAATTGGAGGAGTAATTGTTGTTATAATAATTATCCTATATATTAGAAAAAGAAAGAG ACATCAGGAGTTTGAGGAATTTGAGGAAATTTAA
Upstream 100 bases:
>100_bases GTATGTAATTTTGAACACCATATCCTAAAGAGATTAAGCTAACCATTGCTAAAACTCCTATTACAATGCCAATAATCGTC AATAAACTCTGAGTTCTTTT
Downstream 100 bases:
>100_bases ATAGAACTCTCGTAATGAATAAATAATTTATTGGCAATATGTCGATATCCATATTTTTGTAAAGTTATAAATTTAATATT CTAATGTCATATGCAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI
Sequences:
>Translated_437_residues MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI >Mature_437_residues MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI
Specific function: Unknown
COG id: COG1361
COG function: function code M; S-layer domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1506_METJA (Q58901)
Other databases:
- EMBL: L77117 - PIR: A64488 - RefSeq: NP_248513.1 - ProteinModelPortal: Q58901 - GeneID: 1452413 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1506 - NMPDR: fig|243232.1.peg.1550 - TIGR: MJ1506 - HOGENOM: HBG538992 - OMA: TTFYLES - ProtClustDB: CLSK2393123 - BioCyc: MJAN243232:MJ_1506-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50391; Mature: 50391
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe672188)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSI CEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAIQIDAPQYQPNVIHPGDDVDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGK CEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC ATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEVDKEDGKETSHHYEITKIYYL EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEEEE HVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV EEEEEEEEEEECCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCEEEE GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQ EEEECCCEEEEEEEEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEEHHHHCCC PYIYLDDVKNKGDYIEITIGIANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIF CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEHCCCCCCCCCCCCEEE EIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKEESLSPMYIIGGVIVVIIIIL EEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECHHCCCCCEEHHHHHHHHHHHHH YIRKRKRHQEFEEFEEI HHHHHHHHHHHHHHHCH >Mature Secondary Structure MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSI CEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAIQIDAPQYQPNVIHPGDDVDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGK CEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC ATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEVDKEDGKETSHHYEITKIYYL EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEEEE HVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV EEEEEEEEEEECCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCEEEE GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQ EEEECCCEEEEEEEEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEEHHHHCCC PYIYLDDVKNKGDYIEITIGIANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIF CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEHCCCCCCCCCCCCEEE EIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKEESLSPMYIIGGVIVVIIIIL EEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECHHCCCCCEEHHHHHHHHHHHHH YIRKRKRHQEFEEFEEI HHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087