Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669700

Identifier: 15669700

GI number: 15669700

Start: 1478759

End: 1480072

Strand: Reverse

Name: 15669700

Synonym: MJ1506

Alternate gene names: NA

Gene position: 1480072-1478759 (Counterclockwise)

Preceding gene: 15669704

Following gene: 15669699

Centisome position: 88.89

GC content: 29.38

Gene sequence:

>1314_bases
TTGCTTTATATTCTTAAATGCAAAAGTAATTATATCATCAACTTTCATAGACTTCCCCAAAAAACATCTAAAGCTTTATA
TACAAATATAAGCTTAAGCTTTATATATAGATTTATGTGGGGGATTATGATGAAGAAACTTTTGATAATTTTAATTGGAT
TTATTTTGCTATCTTCAATATCTGCCATTCAAATAGATGCTCCTCAGTATCAGCCGAATGTTATTCATCCTGGGGATGAT
GTGGATTTGTGGATTAAGATAAACAATGATAATTATGATAATGAAGTTAAAAACATAGTTGTTGAAGTAACTCCACACTA
TCCATTTGAGTTGAGGCAGGTTAATCCAATTAAGGGGAAAGCAACAATCAGCCATTTAAATCCTGGAGAATCAGACACTG
TATATTTCAAACTACATGTTGATGAAAACGCCCCATCAAGAGATTATAGGATAGACGTAAAAGTAAGTTATGATGAAGTT
GATAAAGAGGATGGAAAAGAAACAAGCCACCACTATGAAATAACTAAAATCTATTATCTACATGTTTATGGAATAGCAAG
CTTTGAAATTAATATAGATGATACTTCAATAATTCCAGGAAAAACAAAAACTATAAAATTAGACATAAAAAATGTAGGAA
CTGGAAATGCAAAATATTTAAACCTTTATTTAATTGGAAATGATAAAATCAATATTTTAGGAGGAAGTTTAATTTTTGTT
GGATGTTTAAAAGCAAATAATCAATATATCATCCCTATAAAAATATACGCAGTTCCAGAAATTGAGGATGGCATATACTC
AATTAATGCAAACTTATTTTGGGTTGGGGAGGATGGTAAGCAGTATAATTCAACAATTCCTTTAAATATAAGGGTTGTAA
AGAAGATTTATGCAAACCAGCCGTATATTTATTTAGATGATGTAAAAAATAAAGGAGATTATATAGAGATAACTATTGGA
ATTGCAAATAGGGGAACTACAAAGATTAAGCATTGTGTAATGACTTTAACTGCAAATGGGAGGAATTATACCAAGTATAT
TGGAGATTTGGATGAAGATGATTATGACACTTCAATCTTTGAAATAAAGGAGTTTGGGGATATTCCAATTAAGGTAACTG
TTACATACTTTGATGACTATCACAACCCATATAACGCTACAGAGACATTCAATATACATGTAGAAAAAGTTAAAAAAGAG
GAATCATTAAGTCCAATGTATATAATTGGAGGAGTAATTGTTGTTATAATAATTATCCTATATATTAGAAAAAGAAAGAG
ACATCAGGAGTTTGAGGAATTTGAGGAAATTTAA

Upstream 100 bases:

>100_bases
GTATGTAATTTTGAACACCATATCCTAAAGAGATTAAGCTAACCATTGCTAAAACTCCTATTACAATGCCAATAATCGTC
AATAAACTCTGAGTTCTTTT

Downstream 100 bases:

>100_bases
ATAGAACTCTCGTAATGAATAAATAATTTATTGGCAATATGTCGATATCCATATTTTTGTAAAGTTATAAATTTAATATT
CTAATGTCATATGCAAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD
VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV
DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV
GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG
IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE
ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI

Sequences:

>Translated_437_residues
MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD
VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV
DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV
GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG
IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE
ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI
>Mature_437_residues
MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSISAIQIDAPQYQPNVIHPGDD
VDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGKATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEV
DKEDGKETSHHYEITKIYYLHVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV
GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQPYIYLDDVKNKGDYIEITIG
IANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIFEIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKE
ESLSPMYIIGGVIVVIIIILYIRKRKRHQEFEEFEEI

Specific function: Unknown

COG id: COG1361

COG function: function code M; S-layer domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1506_METJA (Q58901)

Other databases:

- EMBL:   L77117
- PIR:   A64488
- RefSeq:   NP_248513.1
- ProteinModelPortal:   Q58901
- GeneID:   1452413
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1506
- NMPDR:   fig|243232.1.peg.1550
- TIGR:   MJ1506
- HOGENOM:   HBG538992
- OMA:   TTFYLES
- ProtClustDB:   CLSK2393123
- BioCyc:   MJAN243232:MJ_1506-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50391; Mature: 50391

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe672188)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSI
CEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAIQIDAPQYQPNVIHPGDDVDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGK
CEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC
ATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEVDKEDGKETSHHYEITKIYYL
EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEEEE
HVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV
EEEEEEEEEEECCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCEEEE
GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQ
EEEECCCEEEEEEEEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEEHHHHCCC
PYIYLDDVKNKGDYIEITIGIANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIF
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEHCCCCCCCCCCCCEEE
EIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKEESLSPMYIIGGVIVVIIIIL
EEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECHHCCCCCEEHHHHHHHHHHHHH
YIRKRKRHQEFEEFEEI
HHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLYILKCKSNYIINFHRLPQKTSKALYTNISLSFIYRFMWGIMMKKLLIILIGFILLSSI
CEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAIQIDAPQYQPNVIHPGDDVDLWIKINNDNYDNEVKNIVVEVTPHYPFELRQVNPIKGK
CEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC
ATISHLNPGESDTVYFKLHVDENAPSRDYRIDVKVSYDEVDKEDGKETSHHYEITKIYYL
EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEEEEE
HVYGIASFEINIDDTSIIPGKTKTIKLDIKNVGTGNAKYLNLYLIGNDKINILGGSLIFV
EEEEEEEEEEECCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCEEEE
GCLKANNQYIIPIKIYAVPEIEDGIYSINANLFWVGEDGKQYNSTIPLNIRVVKKIYANQ
EEEECCCEEEEEEEEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEEHHHHCCC
PYIYLDDVKNKGDYIEITIGIANRGTTKIKHCVMTLTANGRNYTKYIGDLDEDDYDTSIF
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEHCCCCCCCCCCCCEEE
EIKEFGDIPIKVTVTYFDDYHNPYNATETFNIHVEKVKKEESLSPMYIIGGVIVVIIIIL
EEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECHHCCCCCEEHHHHHHHHHHHHH
YIRKRKRHQEFEEFEEI
HHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087