| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is mjaVM
Identifier: 15669692
GI number: 15669692
Start: 1470766
End: 1471644
Strand: Direct
Name: mjaVM
Synonym: MJ1498
Alternate gene names: 15669692
Gene position: 1470766-1471644 (Clockwise)
Preceding gene: 15669691
Following gene: 15669701
Centisome position: 88.34
GC content: 30.15
Gene sequence:
>879_bases ATGGAGATAAATAAAATCTACTGTATGGATTGTTTAGAGGGAATGAAACAGTTAAAAGATAAGACAGTTGATGTTGTTGT TACGTCTCCACCCTATAATATTGGCATAAAATACAACAAATACTCTGATAATTTAAGTAGAGAAGATTATTTAAATTGGA TTGAAGAAGTTGTCAAAGAAATAAAGAGAGTATTAAAAGATGACGGCTCATTTTTTATAAATGTTGGCTATACTGCAAAA GACCCGTGGATTGCCTTTGATGTTGCTAATGTTATAAGAAAACATTTTAAATTACAAAATACTATACATTGGGTAAAATC AATTGCAATACAAAAAGAAGATGTTGGAAATTACCCAAATATTATTGGAGATATTGCTGTTGGACATTACAAGCCAATAA ACAGTGATAGATTTTTAAGTATAATGCATGAATATATTTTCCACTTCACAAAAAATGGGAACGTTAAGTTAGACAAATTA GCAATTGGTGTTCCTTATCAGGATAAAAGCAATATAAAGAGATTTAACAGAAAAGGAGATTTAAGAGATAGGGGAAATAC GTGGTTTATCCCTTATGAAACAATCCAATCAAAAGAAAAAGAAAGACCTCATCCTGCAACATTTCCTCCAAAACTTCCGG AGATGTGTATTAAATTGCATGGTGTTAAAAAGACAAATCTTGTTTTAGACCCATTTATGGGAATTGGAAGCACAGCAATA GCATGTATTAGGTTAGGGATTGATTATATTGGCTTTGAGATTGATGAATACTATTGCAGAGTTGCAGAGGAGAGGATAAA AAAAGAACTTTTAAAAACAGATGGAAAATTTGATAATGTAAAAAACAAAAACATAATTACTCTTGATGCATTTATTTAA
Upstream 100 bases:
>100_bases AAAGAAGAATATTTAAACTTAAATGATTTTGATAGGGGAATTAAAGAAGTAGAGAAGCTTGCAGAATTGATGATAGAATA AATAATGATGGGGATTAAAA
Downstream 100 bases:
>100_bases ATAGTGTTCTTAAGATTGTGAACAGTCGTTTTTAGAGAATTTGCTAAATTTTTTATATTTTGAACTCCTGTCGCAGAACC TTCTAAATTTTCTAATTCAC
Product: type II R/M system modification methyltransferase
Products: NA
Alternate protein names: M.MjaV; N-4 cytosine-specific methyltransferase MjaV
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MEINKIYCMDCLEGMKQLKDKTVDVVVTSPPYNIGIKYNKYSDNLSREDYLNWIEEVVKEIKRVLKDDGSFFINVGYTAK DPWIAFDVANVIRKHFKLQNTIHWVKSIAIQKEDVGNYPNIIGDIAVGHYKPINSDRFLSIMHEYIFHFTKNGNVKLDKL AIGVPYQDKSNIKRFNRKGDLRDRGNTWFIPYETIQSKEKERPHPATFPPKLPEMCIKLHGVKKTNLVLDPFMGIGSTAI ACIRLGIDYIGFEIDEYYCRVAEERIKKELLKTDGKFDNVKNKNIITLDAFI
Sequences:
>Translated_292_residues MEINKIYCMDCLEGMKQLKDKTVDVVVTSPPYNIGIKYNKYSDNLSREDYLNWIEEVVKEIKRVLKDDGSFFINVGYTAK DPWIAFDVANVIRKHFKLQNTIHWVKSIAIQKEDVGNYPNIIGDIAVGHYKPINSDRFLSIMHEYIFHFTKNGNVKLDKL AIGVPYQDKSNIKRFNRKGDLRDRGNTWFIPYETIQSKEKERPHPATFPPKLPEMCIKLHGVKKTNLVLDPFMGIGSTAI ACIRLGIDYIGFEIDEYYCRVAEERIKKELLKTDGKFDNVKNKNIITLDAFI >Mature_292_residues MEINKIYCMDCLEGMKQLKDKTVDVVVTSPPYNIGIKYNKYSDNLSREDYLNWIEEVVKEIKRVLKDDGSFFINVGYTAK DPWIAFDVANVIRKHFKLQNTIHWVKSIAIQKEDVGNYPNIIGDIAVGHYKPINSDRFLSIMHEYIFHFTKNGNVKLDKL AIGVPYQDKSNIKRFNRKGDLRDRGNTWFIPYETIQSKEKERPHPATFPPKLPEMCIKLHGVKKTNLVLDPFMGIGSTAI ACIRLGIDYIGFEIDEYYCRVAEERIKKELLKTDGKFDNVKNKNIITLDAFI
Specific function: This methylase recognizes the double-stranded sequence GTAC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the MjaV endonuclease (Potential)
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily
Homologues:
Organism=Escherichia coli, GI87082238, Length=272, Percent_Identity=27.5735294117647, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTM5_METJA (Q58893)
Other databases:
- EMBL: L77117 - PIR: A64487 - RefSeq: NP_248505.1 - ProteinModelPortal: Q58893 - SMR: Q58893 - REBASE: 3897 - GeneID: 1452405 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1498 - NMPDR: fig|243232.1.peg.1542 - TIGR: MJ1498 - HOGENOM: HBG493024 - OMA: DIAVGHY - ProtClustDB: CLSK876599 - BioCyc: MJAN243232:MJ_1498-MONOMER - BRENDA: 2.1.1.113 - InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 - PRINTS: PR00508
Pfam domain/function: PF01555 N6_N4_Mtase
EC number: =2.1.1.113
Molecular weight: Translated: 33878; Mature: 33878
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINKIYCMDCLEGMKQLKDKTVDVVVTSPPYNIGIKYNKYSDNLSREDYLNWIEEVVKE CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH IKRVLKDDGSFFINVGYTAKDPWIAFDVANVIRKHFKLQNTIHWVKSIAIQKEDVGNYPN HHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IIGDIAVGHYKPINSDRFLSIMHEYIFHFTKNGNVKLDKLAIGVPYQDKSNIKRFNRKGD HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCC LRDRGNTWFIPYETIQSKEKERPHPATFPPKLPEMCIKLHGVKKTNLVLDPFMGIGSTAI CCCCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHHHH ACIRLGIDYIGFEIDEYYCRVAEERIKKELLKTDGKFDNVKNKNIITLDAFI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MEINKIYCMDCLEGMKQLKDKTVDVVVTSPPYNIGIKYNKYSDNLSREDYLNWIEEVVKE CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH IKRVLKDDGSFFINVGYTAKDPWIAFDVANVIRKHFKLQNTIHWVKSIAIQKEDVGNYPN HHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IIGDIAVGHYKPINSDRFLSIMHEYIFHFTKNGNVKLDKLAIGVPYQDKSNIKRFNRKGD HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCC LRDRGNTWFIPYETIQSKEKERPHPATFPPKLPEMCIKLHGVKKTNLVLDPFMGIGSTAI CCCCCCEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHHHH ACIRLGIDYIGFEIDEYYCRVAEERIKKELLKTDGKFDNVKNKNIITLDAFI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087