| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is argE [C]
Identifier: 15669691
GI number: 15669691
Start: 1469706
End: 1470746
Strand: Direct
Name: argE [C]
Synonym: MJ1497
Alternate gene names: 15669691
Gene position: 1469706-1470746 (Clockwise)
Preceding gene: 15669690
Following gene: 15669692
Centisome position: 88.27
GC content: 27.09
Gene sequence:
>1041_bases ATGATAATTATGGATTATTTAAAAATCTTAGAGGATTTGGTGAAAATTAGGACGGATAATAGAATTGGTGTTAAAAAGGC ATTTAAATATTTATCTAATCTTTTCAATAACTTAGGAATAAAAAATACTATCATTGAAGGATGCTTTGTAGCATATAAAG AAAAAGAAAACTTTGATTTGATATTAAATTCACATATAGACACTGTAAAGATTCAATCAAATTTTAAAAAAGATGATAAC AATTTTTATGGGACTGGAGTTATAGATGCTAAAGGGAATGTGGTTTTAATGATTCATGCTTTTTTAAATAGCAATAACTC TCTATTAGTTATATCTCCTGATGAAGAAACAGAATCAAATGGTATTTACAATTTTTGCCAATATTTAAGAAATAAAAATA AAATTCAAAGAGGTATTAAATGCATAGTTGGAGAGCCTACTGACTTAAATGTTTGTATTGGACATAAAGGAAGATTTGAG TATATTGTTGAAAGTTTTGGGGAGGCGAGGCATGCCTCATCTCAAGGCCTAAATCCAATAGAAATCTTAAGCAGAGTTAT TTTAGATTTAAAAAATCTTCCTTTGGAAAAGATTAAGGTTGATAAAATCTACAGTTCTTCAATAACTCCAACCATAATAA AAGGAGGAATTCAAAGCAATATCATTCCAGATTATGCTTATGTCTTATTTGATGTTAGAAGTGTTGAAAAAGATATAATA AAAAAGATAGACGACTTTTTATCTCAAAAAAATTATTCAAAGCATATAAAAAGCTCATTAAATCCTGAAAGACATTATGC TAATTTCTACATGCTTGAAAATAAAGAGTTAATAAATAAGTTGTCTAAGCACTTTAAAATATCATTTTTTAATGCTACTT GCGAAGCATATTACTTCAACAAATTTTTAAAGGCAGATACTATTATTTATGGTGTTGGCAAATTAGAGCTTGCCCATTCT AAAGAAGAATATTTAAACTTAAATGATTTTGATAGGGGAATTAAAGAAGTAGAGAAGCTTGCAGAATTGATGATAGAATA A
Upstream 100 bases:
>100_bases AAACCTACAAATGTAAAAATTACTCAACAGCAATGCTTGAATTTAAGTGTAGTGATATTGATTTAAATGAAATTATTGGA GAAAAAGTAGAATTTATGAG
Downstream 100 bases:
>100_bases ATAATGATGGGGATTAAAAATGGAGATAAATAAAATCTACTGTATGGATTGTTTAGAGGGAATGAAACAGTTAAAAGATA AGACAGTTGATGTTGTTGTT
Product: acetylornithine deacetylase ArgE
Products: acetate; L-ornithine
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIIMDYLKILEDLVKIRTDNRIGVKKAFKYLSNLFNNLGIKNTIIEGCFVAYKEKENFDLILNSHIDTVKIQSNFKKDDN NFYGTGVIDAKGNVVLMIHAFLNSNNSLLVISPDEETESNGIYNFCQYLRNKNKIQRGIKCIVGEPTDLNVCIGHKGRFE YIVESFGEARHASSQGLNPIEILSRVILDLKNLPLEKIKVDKIYSSSITPTIIKGGIQSNIIPDYAYVLFDVRSVEKDII KKIDDFLSQKNYSKHIKSSLNPERHYANFYMLENKELINKLSKHFKISFFNATCEAYYFNKFLKADTIIYGVGKLELAHS KEEYLNLNDFDRGIKEVEKLAELMIE
Sequences:
>Translated_346_residues MIIMDYLKILEDLVKIRTDNRIGVKKAFKYLSNLFNNLGIKNTIIEGCFVAYKEKENFDLILNSHIDTVKIQSNFKKDDN NFYGTGVIDAKGNVVLMIHAFLNSNNSLLVISPDEETESNGIYNFCQYLRNKNKIQRGIKCIVGEPTDLNVCIGHKGRFE YIVESFGEARHASSQGLNPIEILSRVILDLKNLPLEKIKVDKIYSSSITPTIIKGGIQSNIIPDYAYVLFDVRSVEKDII KKIDDFLSQKNYSKHIKSSLNPERHYANFYMLENKELINKLSKHFKISFFNATCEAYYFNKFLKADTIIYGVGKLELAHS KEEYLNLNDFDRGIKEVEKLAELMIE >Mature_346_residues MIIMDYLKILEDLVKIRTDNRIGVKKAFKYLSNLFNNLGIKNTIIEGCFVAYKEKENFDLILNSHIDTVKIQSNFKKDDN NFYGTGVIDAKGNVVLMIHAFLNSNNSLLVISPDEETESNGIYNFCQYLRNKNKIQRGIKCIVGEPTDLNVCIGHKGRFE YIVESFGEARHASSQGLNPIEILSRVILDLKNLPLEKIKVDKIYSSSITPTIIKGGIQSNIIPDYAYVLFDVRSVEKDII KKIDDFLSQKNYSKHIKSSLNPERHYANFYMLENKELINKLSKHFKISFFNATCEAYYFNKFLKADTIIYGVGKLELAHS KEEYLNLNDFDRGIKEVEKLAELMIE
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1497_METJA (Q58892)
Other databases:
- EMBL: L77117 - PIR: H64486 - RefSeq: NP_248504.1 - ProteinModelPortal: Q58892 - GeneID: 1452404 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1497 - NMPDR: fig|243232.1.peg.1541 - TIGR: MJ1497 - OMA: ISFFNAT - ProtClustDB: CLSK2517738 - BioCyc: MJAN243232:MJ_1497-MONOMER - InterPro: IPR002933 - InterPro: IPR011650
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20; SSF55031 Peptidase_M20_dimer
EC number: 3.5.1.16
Molecular weight: Translated: 39800; Mature: 39800
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: ACT_SITE 67-67 ACT_SITE 115-115
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMDYLKILEDLVKIRTDNRIGVKKAFKYLSNLFNNLGIKNTIIEGCFVAYKEKENFDL CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCEE ILNSHIDTVKIQSNFKKDDNNFYGTGVIDAKGNVVLMIHAFLNSNNSLLVISPDEETESN EEECCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCC GIYNFCQYLRNKNKIQRGIKCIVGEPTDLNVCIGHKGRFEYIVESFGEARHASSQGLNPI CHHHHHHHHHCHHHHHHCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH EILSRVILDLKNLPLEKIKVDKIYSSSITPTIIKGGIQSNIIPDYAYVLFDVRSVEKDII HHHHHHHHHHHCCCHHHEEHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH KKIDDFLSQKNYSKHIKSSLNPERHYANFYMLENKELINKLSKHFKISFFNATCEAYYFN HHHHHHHHCCCHHHHHHHCCCCCHHHEEEEEEECHHHHHHHHHHEEEEEECCHHHHHHHH KFLKADTIIYGVGKLELAHSKEEYLNLNDFDRGIKEVEKLAELMIE HHHHHCEEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIMDYLKILEDLVKIRTDNRIGVKKAFKYLSNLFNNLGIKNTIIEGCFVAYKEKENFDL CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCEE ILNSHIDTVKIQSNFKKDDNNFYGTGVIDAKGNVVLMIHAFLNSNNSLLVISPDEETESN EEECCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCC GIYNFCQYLRNKNKIQRGIKCIVGEPTDLNVCIGHKGRFEYIVESFGEARHASSQGLNPI CHHHHHHHHHCHHHHHHCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH EILSRVILDLKNLPLEKIKVDKIYSSSITPTIIKGGIQSNIIPDYAYVLFDVRSVEKDII HHHHHHHHHHHCCCHHHEEHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH KKIDDFLSQKNYSKHIKSSLNPERHYANFYMLENKELINKLSKHFKISFFNATCEAYYFN HHHHHHHHCCCHHHHHHHCCCCCHHHEEEEEEECHHHHHHHHHHEEEEEECCHHHHHHHH KFLKADTIIYGVGKLELAHSKEEYLNLNDFDRGIKEVEKLAELMIE HHHHHCEEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Glutathione. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N2-acetyl-L-ornithine; H2O
Specific reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087