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The map label for this gene is 15669669

Identifier: 15669669

GI number: 15669669

Start: 1447495

End: 1448535

Strand: Direct

Name: 15669669

Synonym: MJ1477

Alternate gene names: NA

Gene position: 1447495-1448535 (Clockwise)

Preceding gene: 15669668

Following gene: 15669671

Centisome position: 86.94

GC content: 29.59

Gene sequence:

>1041_bases
GTGCATTTAAATAAAATTAGGGGAAAGAACATGAAGAAAAGCCATATTTTAGGAATAATAATTTGCATTATTTTAATTGT
AGGATTTTTTATTTCATTTGATAGTACTTTTTTAGATAACCCTAAAATGATGTCTAAATCTAAAAATAATATTAGAAATG
CGGAAAACCTTACAAATATCAGCAAAAATTCTAACAATTTAAAATTTTTATGGGCATATCAACTTCAAAATGCAGATATT
GATGAAATAGCAAACTCAAACTTTACTTTAATTGTTATAGATTATTCAAAAGATGGGACTGAAAATGGAAAATATAGTGA
AGAAGAGATAGAAAAGCTTAAAAAAGCTGGAAAAATACCTATTGCCTATATCAGCATTGGAGAGGCTGAAGATTATAGGT
TCTATTGGGACAATGAATGGCTAAAAAATCCTCCAAAGTGGTTAGGAGATGAAAACCCAGAATGGGAGGGCTGTTATGCT
GTGAAATATTGGCATCCAGAATGGAAGAAAATAATTTTTAGCTATTTAGATAAAATTATTCAGCAAGGATTCTGTGGAGT
TTATTTAGATAAGGTTGATGAGTTCGAATACTGGGCAGAAAATGGCTATGATGAAGATTTTACAGCAAAGGAGATGATTA
AATTTATTGTTGAGATATCAAACTACTGCAGAAACAAAACTAACAACAGCTTTATAATAATTCCACAAAATGGTGAAAGA
TTATTGGAGTACGATAAACATGGAAAGTTATTAAATACAGTTTCTGGATGGGCTGTTGAAGATTTGTTTTATGATGGTGT
AGAGCAAAAGACAGAGGAAGAGATAAATGAAAGAATAAAATTGTTGGATAAAGTAAAAGATTCTGGAAAGTTTGTTTTAG
TGGTTGATTATGTTGATGATGGAACAAAAACAAATGAAAATTTGAAGAGAGTTGAAGATTTTATTAATAAAAGCTTAGAT
AAAGGGTATGTCCCCTATGTTGCTAAATCCGATAGAGAATTAGACGAACTAAATACATGGTGGCTAAAATTGATAAATTA
A

Upstream 100 bases:

>100_bases
GAAAAAATCCCAGAGCATAAAAAAGAACTCTGCAAAATAATCTTTAAGAGATTGGTTAATAGGGCTTTTATAAGTGGAAA
GGAGGCATGGACGTTAATGA

Downstream 100 bases:

>100_bases
TTTCTATTTTCTTTCTTTTTCTTATAGAGCTTCCAAACTCTACAGAATGAGCAGATTTTTCCAGCAGATGTCATTCCACA
AACCTCACACTCTCTAAATT

Product: hypothetical protein

Products: AMP; diphosphate; L-cysteinyl-tRNA(Cys)

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MHLNKIRGKNMKKSHILGIIICIILIVGFFISFDSTFLDNPKMMSKSKNNIRNAENLTNISKNSNNLKFLWAYQLQNADI
DEIANSNFTLIVIDYSKDGTENGKYSEEEIEKLKKAGKIPIAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYA
VKYWHPEWKKIIFSYLDKIIQQGFCGVYLDKVDEFEYWAENGYDEDFTAKEMIKFIVEISNYCRNKTNNSFIIIPQNGER
LLEYDKHGKLLNTVSGWAVEDLFYDGVEQKTEEEINERIKLLDKVKDSGKFVLVVDYVDDGTKTNENLKRVEDFINKSLD
KGYVPYVAKSDRELDELNTWWLKLIN

Sequences:

>Translated_346_residues
MHLNKIRGKNMKKSHILGIIICIILIVGFFISFDSTFLDNPKMMSKSKNNIRNAENLTNISKNSNNLKFLWAYQLQNADI
DEIANSNFTLIVIDYSKDGTENGKYSEEEIEKLKKAGKIPIAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYA
VKYWHPEWKKIIFSYLDKIIQQGFCGVYLDKVDEFEYWAENGYDEDFTAKEMIKFIVEISNYCRNKTNNSFIIIPQNGER
LLEYDKHGKLLNTVSGWAVEDLFYDGVEQKTEEEINERIKLLDKVKDSGKFVLVVDYVDDGTKTNENLKRVEDFINKSLD
KGYVPYVAKSDRELDELNTWWLKLIN
>Mature_346_residues
MHLNKIRGKNMKKSHILGIIICIILIVGFFISFDSTFLDNPKMMSKSKNNIRNAENLTNISKNSNNLKFLWAYQLQNADI
DEIANSNFTLIVIDYSKDGTENGKYSEEEIEKLKKAGKIPIAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYA
VKYWHPEWKKIIFSYLDKIIQQGFCGVYLDKVDEFEYWAENGYDEDFTAKEMIKFIVEISNYCRNKTNNSFIIIPQNGER
LLEYDKHGKLLNTVSGWAVEDLFYDGVEQKTEEEINERIKLLDKVKDSGKFVLVVDYVDDGTKTNENLKRVEDFINKSLD
KGYVPYVAKSDRELDELNTWWLKLIN

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1477_METJA (Q58872)

Other databases:

- EMBL:   L77117
- PIR:   D64484
- RefSeq:   NP_248482.1
- ProteinModelPortal:   Q58872
- SMR:   Q58872
- GeneID:   1452382
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1477
- NMPDR:   fig|243232.1.peg.1519
- TIGR:   MJ1477
- HOGENOM:   HBG724425
- OMA:   AEDYRFY
- ProtClustDB:   CLSK2749998
- BioCyc:   MJAN243232:MJ_1477-MONOMER
- InterPro:   IPR016063
- InterPro:   IPR017853
- InterPro:   IPR016062
- InterPro:   IPR004352
- PRINTS:   PR01545
- TIGRFAMs:   TIGR01370

Pfam domain/function: PF03537 DUF297; SSF51445 Glyco_hydro_cat

EC number: 6.1.1.16

Molecular weight: Translated: 40620; Mature: 40620

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe2422ec)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLNKIRGKNMKKSHILGIIICIILIVGFFISFDSTFLDNPKMMSKSKNNIRNAENLTNI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCHHHCCCHHHHHHC
SKNSNNLKFLWAYQLQNADIDEIANSNFTLIVIDYSKDGTENGKYSEEEIEKLKKAGKIP
CCCCCCEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCE
IAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYAVKYWHPEWKKIIFSYLDKII
EEEEEECCCCCEEEEECCHHHCCCCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
QQGFCGVYLDKVDEFEYWAENGYDEDFTAKEMIKFIVEISNYCRNKTNNSFIIIPQNGER
HCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
LLEYDKHGKLLNTVSGWAVEDLFYDGVEQKTEEEINERIKLLDKVKDSGKFVLVVDYVDD
HHHHHCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GTKTNENLKRVEDFINKSLDKGYVPYVAKSDRELDELNTWWLKLIN
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCH
>Mature Secondary Structure
MHLNKIRGKNMKKSHILGIIICIILIVGFFISFDSTFLDNPKMMSKSKNNIRNAENLTNI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCHHHCCCHHHHHHC
SKNSNNLKFLWAYQLQNADIDEIANSNFTLIVIDYSKDGTENGKYSEEEIEKLKKAGKIP
CCCCCCEEEEEEEEECCCCHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCE
IAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYAVKYWHPEWKKIIFSYLDKII
EEEEEECCCCCEEEEECCHHHCCCCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
QQGFCGVYLDKVDEFEYWAENGYDEDFTAKEMIKFIVEISNYCRNKTNNSFIIIPQNGER
HCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
LLEYDKHGKLLNTVSGWAVEDLFYDGVEQKTEEEINERIKLLDKVKDSGKFVLVVDYVDD
HHHHHCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
GTKTNENLKRVEDFINKSLDKGYVPYVAKSDRELDELNTWWLKLIN
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-cysteine; tRNA(Cys)

Specific reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087